RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 HLCSP50747 726 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SLC12A2P55011 1212 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 DNAJB13P59910 316 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 HERVK_113P63132 956 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 MAT1AQ00266 395 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 MERTKQ12866 999 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 GTF2H2Q13888 395 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 CDK10Q15131 360 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NDUFA9Q16795 377 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 DUSP7Q16829 419 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SLC36A3Q495N2 470 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 FBXO48Q5FWF7 155 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 C10orf62Q5T681 223 aaPredicted RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 RSBN1Q5VWQ0 802 aaPredicted RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 GTF2H2CQ6P1K8 395 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 EPGNQ6UW88 154 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NDUFAF7Q7L592 441 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 PIWIL3Q7Z3Z3 882 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 TMPRSS11BQ86T26 416 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SNX32Q86XE0 403 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 RAB43Q86YS6 212 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ZCCHC7Q8N3Z6 543 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 METTL27Q8N6F8 245 aaPredicted RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 PACRGLQ8N7B6 248 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 OR5T3Q8NGG3 340 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 RP9Q8TA86 221 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 PNPT1Q8TCS8 783 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ELP5Q8TE02 316 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ZFP90Q8TF47 636 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 FIG4Q92562 907 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SLCO4A1Q96BD0 722 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ASB9Q96DX5 294 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 MAP6Q96JE9 813 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 CNDP1Q96KN2 507 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 FCRL1Q96LA6 429 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NSUN5Q96P11 429 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ADI1Q9BV57 179 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ERVK-6Q9BXR3 956 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 RNF32Q9H0A6 362 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 GSTO2Q9H4Y5 243 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SOX17Q9H6I2 414 aaPredicted RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NOL11Q9H8H0 719 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 WDR41Q9HAD4 459 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 LYRM4Q9HD34 91 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 DMRT3Q9NQL9 472 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 PRDM9Q9NQV7 894 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 POLE4Q9NR33 117 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 CD274Q9NZQ7 290 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NDOR1Q9UHB4 597 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 ZNF223Q9UK11 482 aaPredicted RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 DYRK1BQ9Y463 629 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 UGT2A1Q9Y4X1 527 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 CCL27Q9Y4X3 112 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 TNPO3Q9Y5L0 923 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 SNX13Q9Y5W8 968 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 MED13Q9UHV7 2174 aa3.65□□□□□ -1.82
LINC00648-202ENST00000555985 TPRP12270 2363 aaKnown RBP3.65□□□□□ -1.82
LINC00648-202ENST00000555985 NCF1BA6NI72 391 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TMEM200CA6NKL6 621 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NCF1CA8MVU1 366 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 hCG_2039718K7EN88 272 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PPP6CO00743 305 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CHST10O43529 356 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ALOX12BO75342 701 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 BCAS1O75363 584 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 KATNA1O75449 491 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RDH16O75452 317 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 KCNK2O95069 426 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NADKO95544 446 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 STATHP02808 62 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GSNP06396 782 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SLC35G6P0C7Q6 338 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 BMP4P12644 408 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NCF1P14598 390 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 IL1RNP18510 177 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 IMPDH1P20839 514 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RRM2P31350 389 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SERPINB5P36952 375 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 HNF4AP41235 474 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 AVPR1BP47901 424 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GLRBP48167 497 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PPM1FP49593 454 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LIM2P55344 173 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 B2MP61769 119 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 AIMP2Q13155 320 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CHIT1Q13231 466 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 AQP6Q13520 282 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TRIM25Q14258 630 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PFKFB4Q16877 469 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TMEM35AQ53FP2 167 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 IRAK1BP1Q5VVH5 260 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 FAM219BQ5XKK7 198 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF324BQ6AW86 544 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PLAG1Q6DJT9 500 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NXNQ6DKJ4 435 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LETMD1Q6P1Q0 360 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF773Q6PK81 442 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZYG11AQ6WRX3 759 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 FKBP9P1Q75LS8 142 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ABHD13Q7L211 337 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms