RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 HPS6Q86YV9 775 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 LGI4Q8N135 537 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 HORMAD2Q8N7B1 307 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF615Q8N8J6 731 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 SIMC1Q8NDZ2 872 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 C16orf52Q8NHV5 167 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 FBXO30Q8TB52 745 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 ADAMTS15Q8TE58 950 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 XAGE5Q8WWM1 108 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 SLC9A6Q92581 669 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 NCLNQ969V3 563 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 CCDC124Q96CT7 223 aaKnown RBP10.26□□□□□ -0.77
TMEM260-208ENST00000555905 VMP1Q96GC9 406 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 IP6K3Q96PC2 410 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 OR7D2Q96RA2 312 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 WDR77Q9BQA1 342 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-208ENST00000555905 NUDT9Q9BW91 350 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 P2RX2Q9UBL9 471 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 SUCOQ9UBS9 1254 aaKnown RBP10.26□□□□□ -0.77
TMEM260-208ENST00000555905 WASF3Q9UPY6 502 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 PCDHGB3Q9Y5G1 929 aa10.26□□□□□ -0.77
TMEM260-208ENST00000555905 WDFY3Q8IZQ1 3526 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 NSG1A0A0A6YYJ2 146 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 A0A1W2PQ72 361 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 HMGN4O00479 90 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 PEX12O00623 359 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SOCS6O14544 535 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 CREG1O75629 220 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 CLPSP04118 112 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 OR12D1P0DN82 309 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 COX6A1P12074 109 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 BMP2P12643 396 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 ICAM2P13598 275 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 LIFP15018 202 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 HTR1EP28566 365 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MAN2A2P49641 1150 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 GZMMP51124 257 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SLC26A5P58743 744 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 RBBP4Q09028 425 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 GNA13Q14344 377 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MYBPC3Q14896 1274 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 PCOLCEQ15113 449 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 TGIF1Q15583 401 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF630Q2M218 657 aaPredicted RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 HLA-DQA1Q5Y7H0 255 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 HSDL2Q6YN16 418 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 C16orf62Q7Z3J2 963 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SLC30A8Q8IWU4 369 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MICU2Q8IYU8 434 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 C10orf111Q8N326 155 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF321PQ8N8H1 164 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 FAM156AQ8NDB6 213 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 NFAM1Q8NET5 270 aaPredicted RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 OR11G2Q8NGC1 345 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 OR5D16Q8NGK9 328 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 GPR151Q8TDV0 419 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 FGF11Q92914 225 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 RAB8BQ92930 207 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 VSTM2LQ96N03 204 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 STACQ99469 402 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MESP1Q9BRJ9 268 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 LMF2Q9BU23 707 aaKnown RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SEMA4CQ9C0C4 833 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MUC13Q9H3R2 512 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 PIGUQ9H490 435 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SERHL2Q9H4I8 314 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 TMEM38AQ9H6F2 299 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 A4GALTQ9NPC4 353 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 DUSP22Q9NRW4 184 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 EXD2Q9NVH0 621 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 GIN1Q9NXP7 522 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 IL17BQ9UHF5 180 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 SLC7A8Q9UHI5 535 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 PPIEQ9UNP9 301 aaKnown RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 LIPT1Q9Y234 373 aa10.25□□□□□ -0.77
TMEM260-208ENST00000555905 MRPS18BQ9Y676 258 aaKnown RBP10.25□□□□□ -0.77
TMEM260-208ENST00000555905 TRBV11-1A0A0K0K1C0 115 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 C2orf92A0A1B0GVN3 265 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SLC28A2O43868 658 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 HPP00738 406 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ARAFP10398 606 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 NR2F1P10589 423 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ACP2P11117 423 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 GABRA3P34903 492 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 PCGF2P35227 344 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SOX11P35716 441 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 CLCN2P51788 898 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 GPR143P51810 404 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 DCAF7P61962 342 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 CDK6Q00534 326 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 TRAP1Q12931 704 aaKnown RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 IL10RAQ13651 578 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SCARB2Q14108 478 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms