RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZNF615Q8N8J6 731 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 C16orf52Q8NHV5 167 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 ZNF721Q8TF20 911 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 CT55Q8WUE5 264 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 CANT1Q8WVQ1 401 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 PIK3R3Q92569 461 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 STMN2Q93045 179 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 RSRC1Q96IZ7 334 aaKnown RBP9.49□□□□□ -0.89
SRP54-208ENST00000555557 SPATA9Q9BWV2 254 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 MUC13Q9H3R2 512 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 POLR1BQ9H9Y6 1135 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 FOLH1BQ9HBA9 442 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 A4GALTQ9NPC4 353 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 PCDHGA8Q9Y5G5 932 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 HEMK1Q9Y5R4 338 aaPredicted RBP9.49□□□□□ -0.89
SRP54-208ENST00000555557 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 SDK2Q58EX2 2172 aa9.49□□□□□ -0.89
SRP54-208ENST00000555557 TCRBV3S1A0A5B6 114 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 PRAMEF2O60811 474 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 COQ9O75208 318 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ATP6V1G2O95670 118 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 IGKV3-11P04433 115 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 F8A1P23610 371 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 GABRA3P34903 492 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 SLC37A1P57057 533 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 PSG6Q00889 435 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 RHDQ02161 417 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 RBBP4Q09028 425 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 MYBPC3Q14896 1274 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 GPAT3Q53EU6 434 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 CCNJQ5T5M9 372 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ENPP6Q6UWR7 440 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 GALNT15Q8N3T1 639 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 CDRT4Q8N9R6 151 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 OR4N2Q8NGD1 307 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 GPR151Q8TDV0 419 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 DAZLQ92904 295 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 FBXL20Q96IG2 436 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 SEPHS2Q99611 448 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 NUDT9Q9BW91 350 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 TRIM15Q9C019 465 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 RUBCNLQ9H714 662 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 P2RX2Q9UBL9 471 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 NXT1Q9UKK6 140 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 AURKCQ9UQB9 309 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 GXYLT2A0PJZ3 443 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 AQP12BA6NM10 295 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 A8MVJ9 347 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 C5orf58C9J3I9 102 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 M0QX08 132 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 DYRK3O43781 588 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 FCMRO60667 390 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 PRKD3O94806 890 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 SEC24DO94855 1032 aaPredicted RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 PGM3O95394 542 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 H6PDO95479 791 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 C8BP07358 591 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 CHRM4P08173 479 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ALOX5P09917 674 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 RBMS1P29558 406 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 MAP3K8P41279 467 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 RCN1Q15293 331 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 EXOSC6Q5RKV6 272 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 REEP3Q6NUK4 255 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 PAPD4Q6PIY7 484 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 TMEM205Q6UW68 189 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 C16orf62Q7Z3J2 963 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 CPEB2Q7Z5Q1 589 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 AQP12AQ8IXF9 295 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 NLGN4XQ8N0W4 816 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ESX1Q8N693 406 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 NLGN4YQ8NFZ3 816 aaPredicted RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 OR2Y1Q8NGV0 311 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 OR14A16Q8NHC5 309 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 VSTM2LQ96N03 204 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ZNF578Q96N58 590 aaPredicted RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 ITPAQ9BY32 194 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 QRSL1Q9H0R6 528 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 PIGUQ9H490 435 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 S100A14Q9HCY8 104 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 DCAF13Q9NV06 445 aaKnown RBP9.48□□□□□ -0.89
SRP54-208ENST00000555557 FBXO34Q9NWN3 711 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 ANGPT4Q9Y264 503 aa9.48□□□□□ -0.89
SRP54-208ENST00000555557 NUP210LQ5VU65 1888 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 DHRS12A0PJE2 317 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 TMEM247A6NEH6 219 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 DUXAA6NLW8 204 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 H3BNX3 289 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 STMND1H3BQB6 276 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 ASNA1O43681 348 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 BRINP1O60477 761 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 RAD1O60671 282 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
SRP54-208ENST00000555557 ZNF682O95780 498 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 BAG2O95816 211 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 MT-ND1P03886 318 aa9.47□□□□□ -0.89
SRP54-208ENST00000555557 IFI6P09912 130 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms