RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CCSMST1Q4G0I0 132 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF658BQ4V348 819 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PLA1AQ53H76 456 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 SYT14P1Q58G82 188 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CEACAM20Q6UY09 585 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ASPGQ86U10 573 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 MRPL43Q8N983 215 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 OR9A1PQ8NGU1 263 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF480Q8WV37 535 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 FGF11Q92914 225 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 NEIL2Q969S2 332 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PDXPQ96GD0 296 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 LINC00615Q96LM1 132 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ARHGAP9Q9BRR9 750 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PPIL3Q9H2H8 161 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CLEC4MQ9H2X3 399 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ZFP64Q9NPA5 681 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 MYNNQ9NPC7 610 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 C12orf4Q9NQ89 552 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF275Q9NSD4 429 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ASB6Q9NWX5 421 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 COPZ2Q9P299 210 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 FAM8A1Q9UBU6 413 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CBLCQ9ULV8 474 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ITM2BQ9Y287 266 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CSNK1G3Q9Y6M4 447 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 H3BN98 237 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 TRIM77I1YAP6 450 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 MEN1O00255 615 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 PRODHO43272 600 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 HPGDSO60760 199 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 MTRF1O75570 445 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 RRASP10301 218 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 PEPDP12955 493 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 SSTR4P31391 388 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 CHI3L1P36222 383 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 ETV5P41161 510 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 ETV1P50549 477 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 TBPL1P62380 186 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 EFNB1P98172 346 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 AANATQ16613 207 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 FAM214AQ32MH5 1076 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 NDUFAF5Q5TEU4 345 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 PARS2Q7L3T8 475 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 GPAT4Q86UL3 456 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 UBE2J2Q8N2K1 259 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 PPP1R16AQ96I34 528 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 FUZQ9BT04 418 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 WRAP53Q9BUR4 548 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 HEXA-AS1Q9H8Q6 139 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 A4GALTQ9NPC4 353 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 EMC3Q9P0I2 261 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 UBQLN2Q9UHD9 624 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 MGAT4AQ9UM21 535 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 WNT6Q9Y6F9 365 aa10.09□□□□□ -0.79
MTHFD1-210ENST00000555252 LOC102723532A0A0G2JNH3 316 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 RPS10-NUDT3A0A1W2PQS6 291 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 FFAR1O14842 300 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 KIAA0355O15063 1070 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PI15O43692 258 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 OR10H3O60404 316 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PLOD3O60568 738 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 C6orf47O95873 294 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 FURINP09958 794 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 NPPBP16860 134 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF8P17098 575 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 C4BPBP20851 252 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GSTM3P21266 225 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 UQCRC2P22695 453 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LBX1P52954 281 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GAS1P54826 345 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LIM2P55344 173 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 RAB14P61106 215 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SNTA1Q13424 505 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 P2RY14Q15391 338 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 MINDY4Q4G0A6 757 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF385BQ569K4 471 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF57Q68EA5 555 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 TMEM65Q6PI78 240 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PAQR6Q6TCH4 344 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 NXPE4Q6UWF7 544 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF852Q6ZMS4 543 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PRSS42Q7Z5A4 293 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 COMMD7Q86VX2 200 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 CFAP206Q8IYR0 622 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 TMIEQ8NEW7 156 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GPR156Q8NFN8 814 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 OR8K5Q8NH50 307 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC5A11Q8WWX8 675 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SORCS1Q8WY21 1168 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms