RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 OR4C11Q6IEV9 310 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 PWWP2BQ6NUJ5 590 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 NOXRED1Q6NXP6 359 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SPATA19Q7Z5L4 167 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 PPP1R32Q7Z5V6 425 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 TMPRSS12Q86WS5 348 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 OR8K5Q8NH50 307 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 CEP70Q8NHQ1 597 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 BCAS4Q8TDM0 211 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ADAMTS14Q8WXS8 1223 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 LRTOMTQ8WZ04 291 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 N4BP2L2Q92802 583 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 RNF31Q96EP0 1072 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 METTL2AQ96IZ6 378 aaKnown RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 MARK4Q96L34 752 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 CMKLR1Q99788 373 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 C17orf62Q9BQA9 187 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 C1orf50Q9BV19 199 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 EBPLQ9BY08 206 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 NLNQ9BYT8 704 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 STRADBQ9C0K7 418 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF385DQ9H6B1 395 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 DDX31Q9H8H2 851 aaKnown RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FANCEQ9HB96 536 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FBXO8Q9NRD0 319 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 NMRK1Q9NWW6 199 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 RARRES3Q9UL19 164 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 DLGAP4Q9Y2H0 992 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 LOXL2Q9Y4K0 774 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM184BQ9Y519 407 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SLC22A7Q9Y694 548 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 AKAP13Q12802 2813 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 A0A0A6YYC8 382 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 A0A1W2PPL8 197 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 URADA6NGE7 173 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF860A6NHJ4 632 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 I3L1I5 382 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SGK494L7N484 410 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TXNDC9O14530 226 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 NDUFAB1O14561 156 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 DSCR3O14972 297 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF749O43361 778 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TMPRSS11DO60235 418 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 PCDH7O60245 1069 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 GALR3O60755 368 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 NCR1O76036 304 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 GBAP04062 536 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 G6PDP11413 515 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ALOX12P18054 663 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 IL1RNP18510 177 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SDC1P18827 310 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ITGAXP20702 1163 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 HIST1H1TP22492 207 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CERS1P27544 350 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 PEX2P28328 305 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TIA1P31483 386 aaKnown RBP eCLIP5.91□□□□□ -1.464e-8■■□□□ 11.9
SCFD1-212ENST00000554486 PLA2G5P39877 138 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SSR2P43308 183 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 HMGA2P52926 109 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ARFIP1P53367 373 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 DIO3P55073 304 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TGM3Q08188 693 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ABHD18Q0P651 414 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 RUNX2Q13950 521 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 FAM53BQ14153 422 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 HERC3Q15034 1050 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 NDUFA9Q16795 377 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 DEFB134Q4QY38 66 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SPIN4Q56A73 249 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 IL23RQ5VWK5 629 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TLDC1Q6P9B6 456 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TRIM40Q6P9F5 258 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ABHD13Q7L211 337 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 RAB11FIP2Q7L804 512 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CLNKQ7Z7G1 428 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ZCCHC7Q8N3Z6 543 aaKnown RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 LIX1Q8N485 282 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ACOT4Q8N9L9 421 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TTC29Q8NA56 475 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 FNDC5Q8NAU1 212 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SLC38A9Q8NBW4 561 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SRFBP1Q8NEF9 429 aaKnown RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 OR9A4Q8NGU2 314 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 NACC2Q96BF6 587 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SLC45A3Q96JT2 553 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 EGLN2Q96KS0 407 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 RILPQ96NA2 401 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CATSPER2Q96P56 530 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CTRCQ99895 268 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CENPKQ9BS16 269 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TBCDQ9BTW9 1192 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TINAGL1Q9GZM7 467 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SMURF2Q9HAU4 748 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SAR1AQ9NR31 198 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 CUTCQ9NTM9 273 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 AIG1Q9NVV5 245 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 IRAK4Q9NWZ3 460 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 SLC39A1Q9NY26 324 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ASIC5Q9NY37 505 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms