RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 REEP4Q9H6H4 257 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 TRIM45Q9H8W5 580 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 CLK4Q9HAZ1 481 aaKnown RBP12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 ARL8BQ9NVJ2 186 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 TMEM45AQ9NWC5 275 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 CES1P1Q9UKY3 287 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 PCDHA9Q9Y5H5 950 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 CAPN7Q9Y6W3 813 aa12.97□□□□□ -0.33
SPTLC2-202ENST00000554365 ZFHX3Q15911 3703 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 FAM234BA2RU67 622 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 NKX2-6A6NCS4 301 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 KLRC4-KLRK1H3BQV0 150 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 PGRMC2O15173 223 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 PEX1O43933 1283 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 TBX19O60806 448 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 PDE9AO76083 593 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 DDCP20711 480 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 WNT3P56703 355 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 GPR85P60893 370 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 RCAN2Q14206 197 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 MPEG1Q2M385 716 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 CMPK2Q5EBM0 449 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 TMEM211Q6ICI0 200 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 ANKRD26P1Q6NSI1 321 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 BLOC1S3Q6QNY0 202 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 CAMKMTQ7Z624 323 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 FAM9CQ8IZT9 166 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 MARVELD2Q8N4S9 558 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 ASB5Q8WWX0 329 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 COQ8BQ96D53 544 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 ZNF764Q96H86 408 aaPredicted RBP12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 UCK2Q9BZX2 261 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 NECTIN3Q9NQS3 549 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 CCDC167Q9P0B6 97 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 PHF11Q9UIL8 331 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 HRH3Q9Y5N1 445 aa12.96□□□□□ -0.33
SPTLC2-202ENST00000554365 SETD2Q9BYW2 2564 aaPredicted RBP12.96□□□□□ -0.34
SPTLC2-202ENST00000554365 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 TCRBV16S1A1N1A0A5B0 115 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 T-ENOLP0DO92 83 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 NR2F6P10588 404 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 LAMP1P11279 417 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 RNH1P13489 461 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 DRD2P14416 443 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 CPN2P22792 545 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 CHRNB4P30926 498 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 HPCAL1P37235 193 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 POLR2JP52435 117 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 DGKQP52824 942 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 KRT72Q14CN4 511 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 SPANXN4Q5MJ08 99 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 TMEM156Q8N614 296 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 GLB1L3Q8NCI6 653 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 NFAM1Q8NET5 270 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 RND1Q92730 232 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 PRDM9Q9NQV7 894 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 MRGBPQ9NV56 204 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 RNF6Q9Y252 685 aa12.95□□□□□ -0.34
SPTLC2-202ENST00000554365 A0A1W2PS29 197 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 C1orf226A1L170 272 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 NR5A2O00482 541 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 FBP2O00757 339 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 SCN2BO60939 215 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 GUCY1B2O75343 617 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 UBOX5O94941 541 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 COX4I1P13073 169 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 PRDX6P30041 224 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 CLCN2P51788 898 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 ART1P52961 327 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 HEPACAMQ14CZ8 416 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 FAM174BQ3ZCQ3 159 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 SLC48A1Q6P1K1 146 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 ARHGAP11AQ6P4F7 1023 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 TMEM200AQ86VY9 491 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 SNX32Q86XE0 403 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 RPRMLQ8N4K4 120 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 POU5F2Q8N7G0 328 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 OR8J2Q8NGG1 315 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 OR52N2Q8NGI0 321 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 LILRB4Q8NHJ6 448 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 C16orf52Q8NHV5 167 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 FAIM2Q9BWQ8 316 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 DEFB127Q9H1M4 99 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 TP63Q9H3D4 680 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 KCNJ16Q9NPI9 418 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 TAS2R7Q9NYW3 318 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 EHD3Q9NZN3 535 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms