RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DLGAP3O95886 979 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 ATP1B1P05026 303 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 AGXTP21549 392 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 OR1D4P47884 311 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 SELPLGQ14242 412 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 RGNQ15493 299 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 C1orf189Q5VU69 101 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 SAXO2Q658L1 398 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 CPZQ66K79 652 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 JMJD6Q6NYC1 403 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-208ENST00000553868 FAM180BQ6P0A1 224 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 CEACAM20Q6UY09 585 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 CALHM3Q86XJ0 350 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 MICU2Q8IYU8 434 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 SUN3Q8TAQ9 357 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 ZNF583Q96ND8 569 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 ZPBPQ9BS86 351 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 SIRT3Q9NTG7 399 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-208ENST00000553868 ZCCHC3Q9NUD5 404 aaKnown RBP13.49□□□□□ -0.25
SHMT2-208ENST00000553868 C14orf105Q9NVL8 296 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 ACTR3BQ9P1U1 418 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 PTGFRNQ9P2B2 879 aa13.49□□□□□ -0.25
SHMT2-208ENST00000553868 TMEM184BQ9Y519 407 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-208ENST00000553868 PLOD2O00469 737 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ACOT8O14734 319 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 LDB3O75112 727 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ONECUT2O95948 504 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 NT5EP21589 574 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 CRATP43155 626 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 IGLV3-21P80748 117 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-208ENST00000553868 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
SHMT2-208ENST00000553868 OCA2Q04671 838 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 RBBP4Q09028 425 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 RIPK1Q13546 671 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 TP53BP2Q13625 1128 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 TESK1Q15569 626 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 FXNQ16595 210 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 SYT16Q17RD7 645 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 NKAIN1Q4KMZ8 207 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 GCNT6Q5T4J0 391 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 PRAMEF17Q5VTA0 474 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 SZRD1Q7Z422 152 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 C6orf120Q7Z4R8 191 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 SLC30A8Q8IWU4 369 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 OR4N5Q8IXE1 308 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ST13P4Q8IZP2 240 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-208ENST00000553868 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 FAM156AQ8NDB6 213 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 TMEM52Q8NDY8 209 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 OR9A2Q8NGT5 310 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 OR5AK3PQ8NH89 298 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ANKRD9Q96BM1 317 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ELP4Q96EB1 424 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 SLC35G5Q96KT7 338 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 LRFN5Q96NI6 719 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 DGAT2Q96PD7 388 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 RBCK1Q9BYM8 510 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 DDX18Q9NVP1 670 aaKnown RBP13.48□□□□□ -0.25
SHMT2-208ENST00000553868 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
SHMT2-208ENST00000553868 A0A087WV62 115 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 TMEM247A6NEH6 219 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 A8MUI8 341 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 PRSS44E7EML9 344 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 DYRK3O43781 588 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 FKBP6O75344 327 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 KLK3P07288 261 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 ZNF28P17035 718 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 GALNSP34059 522 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 PRIM2P49643 509 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 KHKP50053 298 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 ID2Q02363 134 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 MFSD4BQ5TF39 518 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 LCN8Q6JVE9 175 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 TMEM107Q6UX40 140 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 QSOX2Q6ZRP7 698 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 GOLM1Q8NBJ4 401 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 PNPT1Q8TCS8 783 aaKnown RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 FKBP10Q96AY3 582 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 RBM18Q96H35 190 aaKnown RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 TGIF2Q9GZN2 237 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 RASSF4Q9H2L5 321 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 PIF1Q9H611 641 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms