RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LHX2P50458 406 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 NEK2P51955 445 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 FAM27E3Q08E93 113 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CALCOCO2Q13137 446 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 GTF2H2Q13888 395 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 PFKFB4Q16877 469 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 FAM83EQ2M2I3 478 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 GTF2H2CQ6P1K8 395 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CNEP1R1Q8N9A8 125 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 WDR20Q8TBZ3 569 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CTHRC1Q96CG8 243 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 IPPKQ9H8X2 491 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 ELOVL5Q9NYP7 299 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 EHD3Q9NZN3 535 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 PRODH2Q9UF12 536 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 ADAM29Q9UKF5 820 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 ACOT9Q9Y305 439 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 TNPO3Q9Y5L0 923 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 SIAH2O43255 324 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 HCRTR2O43614 444 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 ABCB7O75027 752 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 UGT2B11O75310 529 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 CLDN9O95484 217 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 TGM6O95932 706 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 ATP1B1P05026 303 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 KLK1P06870 262 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 MTHFD2P13995 350 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 ZNF708P17019 499 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 CLDN18P56856 261 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 HMGCS1Q01581 520 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 MAP4K2Q12851 820 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 EXOSC7Q15024 291 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 PRICKLE4Q2TBC4 344 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 CCNYL2Q5T2Q4 361 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 DESI1Q6ICB0 168 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 C3orf62Q6ZUJ4 267 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 GOLGA7Q7Z5G4 137 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 GBP7Q8N8V2 638 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 ADCY4Q8NFM4 1077 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 NXNL1Q96CM4 212 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 PGM2Q96G03 612 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 GSX2Q9BZM3 304 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 MAT2BQ9NZL9 334 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 WIF1Q9Y5W5 379 aa12.85□□□□□ -0.35
CHMP1A-210ENST00000551981 A0A087X1B8 175 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 C1orf226A1L170 272 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 POU2F1P14859 743 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 CSNK2A2P19784 350 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 DRD5P21918 477 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 UGT2B10P36537 528 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 PPICP45877 212 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 KCNJ5P48544 419 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 MAPK12P53778 367 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 MGAT2Q10469 447 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 FGFBP1Q14512 234 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 BCL2A1Q16548 175 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 TTC19Q6DKK2 380 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 SLC48A1Q6P1K1 146 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 LRRC1Q9BTT6 524 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 PLLPQ9Y342 182 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 PCDHA9Q9Y5H5 950 aa12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 RAI1Q7Z5J4 1906 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-210ENST00000551981 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 FRG2CA6NGY1 282 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 TO15178 435 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 REM1O75628 298 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PEPDP12955 493 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 KRT20P35900 424 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 FEN1P39748 380 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PAFAH1B1P43034 410 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PTH2RP49190 550 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 EEFSECP57772 596 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 GPX6P59796 221 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PSPHP78330 225 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 NAB1Q13506 487 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 EFR3AQ14156 821 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 ACAP2Q15057 778 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms