RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CEACAM20Q6UY09 585 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KRT77Q7Z794 578 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC190Q86UF4 302 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KMT5CQ86Y97 462 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SIAH3Q8IW03 269 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 FAM114A1Q8IWE2 563 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SLC34A3Q8N130 599 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DNAJC22Q8N4W6 341 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RASGEF1AQ8N9B8 481 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 MLKLQ8NB16 471 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ST6GALNAC3Q8NDV1 305 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CSNK2A3Q8NEV1 391 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR1J2Q8NGS2 313 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR1L3Q8NH93 324 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HM13Q8TCT9 377 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TRPC4APQ8TEL6 797 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NAT14Q8WUY8 206 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 UBE2Q2Q8WVN8 375 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 PTERQ96BW5 349 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NTNG2Q96CW9 530 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TMCO6Q96DC7 493 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ARSGQ96EG1 525 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 IMP4Q96G21 291 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 URB1-AS1Q96HZ7 61 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TXNDC15Q96J42 360 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 LINC00615Q96LM1 132 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 LURAP1Q96LR2 239 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 AGAP3Q96P47 875 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 VPS35Q96QK1 796 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR6C1Q96RD1 312 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ABHD1Q96SE0 405 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NPAS2Q99743 824 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 C11orf70Q9BRQ4 267 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TIMM29Q9BSF4 260 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC106Q9BWC9 280 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SF3B5Q9BWJ5 86 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 C1QTNF7Q9BXJ2 289 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NLNQ9BYT8 704 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RTN4RQ9BZR6 473 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SPRTNQ9H040 489 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RBM38Q9H0Z9 239 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR10A4Q9H209 315 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SLC26A1Q9H2B4 701 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR52A5Q9H2C5 316 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 PIGMQ9H3S5 423 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DENND2DQ9H6A0 471 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ESRP2Q9H6T0 727 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ATP13A3Q9H7F0 1226 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DYRK4Q9NR20 520 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SMOXQ9NWM0 555 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RMND1Q9NWS8 449 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GIMAP2Q9UG22 337 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CD84Q9UIB8 345 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ACSL5Q9ULC5 683 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 PLAGL1Q9UM63 463 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RPL26L1Q9UNX3 145 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KCNK6Q9Y257 313 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CHKBQ9Y259 395 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 FARSAQ9Y285 508 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KLF2Q9Y5W3 355 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NCOA6Q14686 2063 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ABCA4P78363 2273 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF106Q9H2Y7 1883 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 LOC102723996A0A087X1L8 192 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 A0A1W2PQ67 120 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 A0A1W2PRQ8 180 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 BICDL2A1A5D9 508 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 WDR91A4D1P6 747 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 ASPDHA6ND91 283 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 OR5K3A6NET4 321 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 OR5K4A6NMS3 321 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 A8MU76 341 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF487B1APH4 448 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 H3BNX3 289 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 MKRN2OSH3BPM6 223 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 UBE2CO00762 179 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 MAP2K7O14733 419 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 TNFRSF13BO14836 293 aaPredicted RBP2.19□□□□□ -2.06
CPSF6-207ENST00000551516 CLGNO14967 610 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 ADAMDEC1O15204 470 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 SPINT2O43291 252 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 GRID2O43424 1007 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 RGS14O43566 566 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 MFSD11O43934 449 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 UGT1A9O60656 530 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 MTX2O75431 263 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 PALMO75781 387 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 SERPINI2O75830 405 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 RSL1D1O76021 490 aaKnown RBP2.19□□□□□ -2.06
CPSF6-207ENST00000551516 SOX30O94993 753 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 CH25HO95992 272 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 EPOP01588 193 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 LCATP04180 440 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 MYBL1P10243 752 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 PSG1P11464 419 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF7P17097 686 aaPredicted RBP2.19□□□□□ -2.06
CPSF6-207ENST00000551516 UGT1A6P19224 532 aa2.19□□□□□ -2.06
CPSF6-207ENST00000551516 TRIM21P19474 475 aaKnown RBP2.19□□□□□ -2.06
CPSF6-207ENST00000551516 UGT1A1P22309 533 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms