RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 CSNK1G2P78368 415 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 BIRC2Q13490 618 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 MORF4L2Q15014 288 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 NKAIN1Q4KMZ8 207 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 C6orf10Q5SRN2 563 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 ASPHD1Q5U4P2 390 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 KLHL35Q6PF15 583 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 IGFL2Q6UWQ7 119 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 SHISA6Q6ZSJ9 500 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 ZC3HC1Q86WB0 502 aaKnown RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 KLHL7Q8IXQ5 586 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 DDIASQ8IXT1 998 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 KLHDC8AQ8IYD2 350 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 NOA1Q8NC60 698 aaKnown RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 SPATA4Q8NEY3 305 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 OR4K1Q8NGD4 311 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 OR9A1PQ8NGU1 263 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 OR2Y1Q8NGV0 311 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 C9orf43Q8TAL5 461 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 MAIP1Q8WWC4 291 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 MR1Q95460 341 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 PTERQ96BW5 349 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 NAPGQ99747 312 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 DPH7Q9BTV6 452 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 ACAT2Q9BWD1 397 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 VPS37BQ9H9H4 285 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 PDE7BQ9NP56 450 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 C20orf96Q9NUD7 363 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 TAC3Q9UHF0 121 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 POLG2Q9UHN1 485 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 RAB21Q9UL25 225 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 PADI1Q9ULC6 663 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 PLCL2Q9UPR0 1127 aa4.55□□□□□ -1.68
SCAF11-214ENST00000550893 FARSAQ9Y285 508 aaKnown RBP4.55□□□□□ -1.68
SCAF11-214ENST00000550893 DNAJC13O75165 2243 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MED12Q93074 2177 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 A0A0J9YVX5 310 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 A0A1B0GX78 115 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TCRBV9S1A1TA0A576 114 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FAM90A8PA6NJQ4 464 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 E7EQ34 232 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 J3QKU1 62 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 RHODO00212 210 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 EIF3FO00303 357 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TAPBPO15533 448 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ZW10O43264 779 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 DNPH1O43598 174 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SLC28A2O43868 658 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 NDUFS3O75489 264 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 APOA4P06727 396 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FAM90A13PP0C7W8 464 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FAM90A24PP0C7X0 464 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SMIM10L1P0DMW3 83 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 IGFBP2P18065 325 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CYP2A7P20853 494 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 GCAP28676 217 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SSTR1P30872 391 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SLC26A3P40879 764 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MAGEA12P43365 314 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MLLT10P55197 1068 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 VSX2P58304 361 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TAS2R50P59544 299 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 GNG11P61952 73 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MAT1AQ00266 395 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 DR1Q01658 176 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PLOD1Q02809 727 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PRDX1Q06830 199 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 RAPSNQ13702 412 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PTGR1Q14914 329 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 OR4D1Q15615 310 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LACTB2Q53H82 288 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 VWA2Q5GFL6 755 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SPANXN3Q5MJ09 141 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 DCAF10Q5QP82 559 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ATG9BQ674R7 924 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PTRHD1Q6GMV3 140 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LRIG3Q6UXM1 1119 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LANCL3Q6ZV70 420 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 GSTA5Q7RTV2 222 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 OTOAQ7RTW8 1153 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CUZD1Q86UP6 607 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CHERPQ8IWX8 916 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CENPLQ8N0S6 344 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PAQR4Q8N4S7 273 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ADPRHL1Q8NDY3 354 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FBXO36Q8NEA4 188 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 OR11G2Q8NGC1 345 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FBXO25Q8TCJ0 367 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CREB3L4Q8TEY5 395 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 WDR60Q8WVS4 1066 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 APOBEC4Q8WW27 367 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ASB5Q8WWX0 329 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 KAT2AQ92830 837 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 RAD51AP1Q96B01 352 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PYCR2Q96C36 320 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 C8orf44Q96CB5 159 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms