RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 VIPR1P32241 457 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 ADAM15Q13444 863 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 NDUFA9Q16795 377 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 ASB18Q6ZVZ8 466 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 BPHLQ86WA6 291 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 DNAJA4Q8WW22 397 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 OR5P2Q8WZ92 322 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 OMA1Q96E52 524 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 KCNK12Q9HB15 430 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 EXTL2Q9UBQ6 330 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 ABHD14A-ACY1A0A1B0GW23 586 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 RFPL3O75679 317 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 NTN1O95631 604 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 SOD2P04179 222 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 DDCP20711 480 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 PTBP1P26599 531 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■■■■□ 21.4
HDAC7-228ENST00000548938 SLC6A1P30531 599 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 PER3P56645 1201 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 DCDC1P59894 354 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 TAP2Q03519 686 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 CNTN1Q12860 1018 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 CDONQ4KMG0 1287 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 IDO2Q6ZQW0 420 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 SLC9B2Q86UD5 537 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 C2orf73Q8N5S3 287 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 TBC1D19Q8N5T2 526 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 OR6T1Q8NGN1 323 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 AP2M1Q96CW1 435 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 CCDC120Q96HB5 630 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 LMLNQ96KR4 655 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 GLTPQ9NZD2 209 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
HDAC7-228ENST00000548938 NCKAP1Q9Y2A7 1128 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 BTN3A3O00478 584 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 PLPP1O14494 284 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 SLC22A5O76082 557 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 EPPINO95925 133 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 TFPIP10646 304 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF155Q12901 538 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 POM121L1PQ3SYA9 428 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 VASNQ6EMK4 673 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 C1orf94Q6P1W5 598 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 MZT2AQ6P582 158 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF782Q6ZMW2 699 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 NR2C2APQ86WQ0 139 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 TEX47Q8TBZ9 253 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 SMPDL3AQ92484 453 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 UCN3Q969E3 161 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 GLYATL1Q969I3 302 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 GPR137Q96N19 417 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZSCAN5AQ9BUG6 496 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 TAS2R7Q9NYW3 318 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 IRGMA1A4Y4 181 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 UBXN7O94888 489 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 CH25HO95992 272 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 HLA-DPB1P04440 258 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 UBL4AP11441 157 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 HK1P19367 917 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 IL20RBQ6UXL0 311 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 FAM20CQ8IXL6 584 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-228ENST00000548938 XAGE5Q8WWM1 108 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 OTULINQ96BN8 352 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF558Q96NG5 402 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 PIGUQ9H490 435 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 MGAT4AQ9UM21 535 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
HDAC7-228ENST00000548938 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 A0A1B0GVC2 190 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 A6NIN4 97 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 CDH11P55287 796 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 RAB8AP61006 207 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms