RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TMEM107Q6UX40 140 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 UFD1Q92890 307 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF559Q9BR84 538 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 OR51I1Q9H343 314 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ISG20L2Q9H9L3 353 aaKnown RBP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ENAMQ9NRM1 1142 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 BTNL2Q9UIR0 455 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 GRIP1Q9Y3R0 1128 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 NOS3P29474 1203 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 UGT2B10P36537 528 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TTC23LQ6PF05 361 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 OR8J2Q8NGG1 315 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 OR52N2Q8NGI0 321 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 OR51A7Q8NH64 312 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 SLC6A18Q96N87 628 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 PITX2Q99697 317 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TREX2Q9BQ50 279 aaPredicted RBP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 AP3M1Q9Y2T2 418 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TANC1Q9C0D5 1861 aa13.83□□□□□ -0.19
HOXC11-202ENST00000546378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 H7C0S8 307 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 J3QLW9 94 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 ALX3O95076 343 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 SCG5P05408 212 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 OSMP13725 252 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF19P17023 458 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 CLDN12P56749 244 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 VEZF1Q14119 521 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 ZER1Q7Z7L7 766 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 TMEM150AQ86TG1 271 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 VRK2Q86Y07 508 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 KIAA1958Q8N8K9 716 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GPR32P1Q8NGA4 272 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 SPRYD4Q8WW59 207 aaPredicted RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 TRIM63Q969Q1 353 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 PLD4Q96BZ4 506 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 KCNE3Q9Y6H6 103 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 FAM186AA6NE01 2351 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 PTPRDP23468 1912 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF780AO75290 641 aaPredicted RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 MT-ND4P03905 459 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 PAICSP22234 425 aaKnown RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 SHC1P29353 583 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 TALDO1P37837 337 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 TEAD2Q15562 447 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 MZT2BQ6NZ67 158 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 PLBD1Q6P4A8 553 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GDPD4Q6W3E5 623 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 CHST9Q7L1S5 443 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GRASPQ7Z6J2 395 aaPredicted RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 LRRC17Q8N6Y2 441 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 GABARAPL3Q9BY60 117 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.2
HOXC11-202ENST00000546378 C1GALT1Q9NS00 363 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 TAAR2Q9P1P5 351 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 PADI2Q9Y2J8 665 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 IRAK3Q9Y616 596 aa13.83□□□□□ -0.2
HOXC11-202ENST00000546378 POP7O75817 140 aaKnown RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 MSL3P1P0C860 447 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 ARSBP15848 533 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 CCR2P41597 374 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 XCR1P46094 333 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 SLC6A12P48065 614 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 HNMTP50135 292 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 SUZ12Q15022 739 aaKnown RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 GPR68Q15743 365 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 GXYLT1Q4G148 440 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 SYT14P1Q58G82 188 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 PSRC1Q6PGN9 363 aaPredicted RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 OXR1Q8N573 874 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 WDR20Q8TBZ3 569 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 CREB3L4Q8TEY5 395 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 ORAI3Q9BRQ5 295 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 SLC46A2Q9BY10 475 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 ERVW-1Q9UQF0 538 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 SHISA3A0PJX4 238 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 C1orf226A1L170 272 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 AKAP8O43823 692 aaKnown RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 OR5F1O95221 314 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 RHCEP18577 417 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 GIFP27352 417 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 MTNR1AP48039 350 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 CRYZQ08257 329 aaKnown RBP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 FGL2Q14314 439 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.2
HOXC11-202ENST00000546378 OR8K5Q8NH50 307 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 OR8K3Q8NH51 312 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF671Q8TAW3 534 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 GRHL3Q8TE85 626 aa13.82□□□□□ -0.2
HOXC11-202ENST00000546378 MAPKAP1Q9BPZ7 522 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms