RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LAMTOR1Q6IAA8 161 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 TMEM64Q6YI46 380 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 COMTD1Q86VU5 262 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 C17orf64Q86WR6 236 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 TMEM25Q86YD3 366 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 MARCH9Q86YJ5 346 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 UBE2J2Q8N2K1 259 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 RAET1EQ8TD07 263 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 SFXN5Q8TD22 340 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 SLC9A6Q92581 669 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 RAD51AP1Q96B01 352 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 GPA33Q99795 319 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 RERGLQ9H628 205 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 WASH6PQ9NQA3 447 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 PTTG3PQ9NZH4 202 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 LIPT1Q9Y234 373 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 EXOGQ9Y2C4 368 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 CLCA3PQ9Y6N3 262 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 MDC1Q14676 2089 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 A0A0G2JPF8 293 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 PRR23AA6NEV1 266 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HNRNPCL3B7ZW38 293 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 CTSLP07711 333 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HNRNPCL4P0DMR1 293 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HSD17B2P37059 387 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 CDH11P55287 796 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 REEP5Q00765 189 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ZNF155Q12901 538 aaPredicted RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 CEP78Q5JTW2 689 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 TRMT11Q7Z4G4 463 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 DCUN1D3Q8IWE4 304 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 GHDCQ8N2G8 530 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 OR6T1Q8NGN1 323 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 EXOSC8Q96B26 276 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 KCTD12Q96CX2 325 aaKnown RBP8.24□□□□□ -1.09
TDP1-204ENST00000545686 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 PCBD2Q9H0N5 130 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ABCG4Q9H172 646 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 KCNN2Q9H2S1 579 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 PIGUQ9H490 435 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 C11orf49Q9H6J7 331 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 RNF186Q9NXI6 227 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 PRKAG2Q9UGJ0 569 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 GPR34Q9UPC5 381 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HTTP42858 3142 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SMIM30A4D0T7 59 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 FAM170BA6NMN3 283 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ISM1B1AKI9 464 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 KIAA0355O15063 1070 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 NDUFS4O43181 175 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ICMTO60725 284 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 NOS1APO75052 506 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 EPPINO95925 133 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 FGBP02675 491 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LRG1P02750 347 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 CHRM5P08912 532 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 DRD2P14416 443 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SLC6A1P30531 599 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 MTNR1BP49286 362 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 AP2S1P53680 142 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 CAV3P56539 151 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 TRAM2Q15035 370 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ESCO2Q56NI9 601 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SPOUT1Q5T280 376 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 AADACL4Q5VUY2 407 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LHX8Q68G74 356 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 FAM180BQ6P0A1 224 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 BHLHB9Q6PI77 547 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 GLCCI1Q86VQ1 547 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LRRC28Q86X40 367 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 ELMOD2Q8IZ81 293 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR4M1Q8NGD0 313 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR8D4Q8NGM9 314 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR5H6Q8NGV6 325 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR2L2Q8NH16 312 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OSTF1Q92882 214 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 RGMAQ96B86 450 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 MOAP1Q96BY2 351 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SLC46A2Q9BY10 475 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 RNF32Q9H0A6 362 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR2AG1Q9H205 316 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 EGLN3Q9H6Z9 239 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SATB2Q9UPW6 733 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 HSPB11Q9Y547 144 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 A0A087WUU8 490 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 A0A1W2PRU2 124 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 RTCAO00442 366 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 SHOXO15266 292 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 TEX28O15482 410 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 APOL3O95236 402 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LALBAP00709 142 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms