RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 RASL10BQ96S79 203 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 UTP23Q9BRU9 249 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NXF5Q9H1B4 397 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC52A3Q9NQ40 469 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FAF1Q9UNN5 650 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GPR55Q9Y2T6 319 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR10H1Q9Y4A9 318 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 K7EM74 188 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PDGFAP04085 211 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SFTPCP11686 197 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DRD5P21918 477 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRPC1P48995 793 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PSG6Q00889 435 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CYLC2Q14093 348 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PAGE3Q5JUK9 113 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OPN5Q6U736 354 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SNX32Q86XE0 403 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC44A2Q8IWA5 706 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GPR151Q8TDV0 419 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 C16orf58Q96GQ5 468 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC35G5Q96KT7 338 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 BTBD9Q96Q07 612 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LMF2Q9BU23 707 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ACTRT3Q9BYD9 372 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.276e-7■■■□□ 14.9
TNFRSF1A-216ENST00000543995 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 Q9N2J8 555 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MGAQ8IWI9 3026 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 A0A096LPI6 279 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR5H15A6NDH6 313 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 A8MVJ9 347 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ACOX3O15254 700 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ALOX5P09917 674 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GABRA3P34903 492 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SOX3P41225 446 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CYB561P49447 251 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CASP9P55211 416 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LY6DQ14210 128 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TUBA3EQ6PEY2 450 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 IGFL2Q6UWQ7 119 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 IL20RBQ6UXL0 311 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PRR22Q8IZ63 422 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC15A4Q8N697 577 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ADAMTS15Q8TE58 950 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HAS2Q92819 552 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OTUB1Q96FW1 271 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GPATCH2Q9NW75 528 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HPF1Q9NWY4 346 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CACNA1BQ00975 2339 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 BBIP1A8MTZ0 92 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CAPN14A8MX76 684 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DPM1O60762 260 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZNF354AO60765 605 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR6B1O95007 311 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NADKO95544 446 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KRT75O95678 551 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KRT16P08779 473 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZCCHC18P0CG32 403 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CT45A8P0DMV1 189 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CT45A9P0DMV2 189 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ACP2P11117 423 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MATN1P21941 496 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KRT20P35900 424 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CD96P40200 585 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TMED10P49755 219 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HLCSP50747 726 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RPS26P62854 115 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 STX5Q13190 355 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NFYCQ13952 458 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GTDC1Q4AE62 458 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CT45A2Q5DJT8 189 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZNF468Q5VIY5 522 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SAXO2Q658L1 398 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 IGFL3Q6UXB1 125 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HPS6Q86YV9 775 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CYP4Z2PQ8N1L4 340 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 POU5F2Q8N7G0 328 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC16A11Q8NCK7 471 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PNPT1Q8TCS8 783 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NEURL3Q96EH8 262 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms