RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DVL3Q92997 716 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ULK4Q96C45 1275 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PGAM5Q96HS1 289 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR52B2Q96RD2 323 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SLCO1B1Q9Y6L6 691 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SLX4Q8IY92 1834 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 HYKKA2RU49 373 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 C7orf72A4D263 438 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 H0Y8G0 127 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 AZIN1O14977 448 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 UGT8Q16880 541 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 GPRC6AQ5T6X5 926 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PLCXD3Q63HM9 321 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 XKRXQ6PP77 449 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SLC29A4Q7RTT9 530 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 FAM129CQ86XR2 697 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ZBTB8OSQ8IWT0 167 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR5L1Q8NGL2 311 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR5M8Q8NGP6 311 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 NUAK2Q9H093 628 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 CLEC18AA5D8T8 446 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 LRIT2A6NDA9 550 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 TUBAL3A6NHL2 446 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PDCD5O14737 125 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 KAT7O95251 611 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 MUC1P15941 1255 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 AKT2P31751 481 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 FAAP100Q0VG06 881 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SERTAD2Q14140 314 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 KRT33BQ14525 404 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 TMEM220Q6QAJ8 160 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 CLEC18BQ6UXF7 455 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 LIMS2Q7Z4I7 341 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 UBAC2Q8NBM4 344 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 CLEC18CQ8NCF0 446 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PDPRQ8NCN5 879 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR13C5Q8NGS8 318 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SPATA22Q8NHS9 363 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ASB15Q8WXK1 588 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ST6GAL2Q96JF0 529 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR5B2Q96R09 309 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ALOXE3Q9BYJ1 711 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SRMSQ9H3Y6 488 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ICKQ9UPZ9 632 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 MDM4O15151 490 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SNAI2O43623 268 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 MT-CYBP00156 380 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 CST3P01034 146 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 CSF3P09919 207 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 ADORA3P0DMS8 318 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 DDOSTP39656 456 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 ASCL1P50553 236 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 IDH3GP51553 393 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 GRAPQ13588 217 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 RNASE10Q5GAN6 216 aaKnown RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 IZUMO3Q5VZ72 239 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 C3P1Q6ZMU1 363 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 GADL1Q6ZQY3 521 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SYT13Q7L8C5 426 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 UBE2J2Q8N2K1 259 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 VWA5B2Q8N398 1253 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 DNAJC22Q8N4W6 341 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 MRGPRX1Q96LB2 322 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 CDCA3Q99618 268 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 WDR83Q9BRX9 315 aaKnown RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 PCDHAC1Q9H158 963 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 HRKO00198 91 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SERPINA4P29622 427 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 GJA4P35212 333 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 TAS2R39P59534 338 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 TAS2R41P59536 307 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 HYAL2Q12891 473 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 MTAPQ13126 283 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SEMA5AQ13591 1074 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 RAB39AQ14964 217 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 HEPACAMQ14CZ8 416 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 DGUOKQ16854 277 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 CRTC3Q6UUV7 619 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 ASB18Q6ZVZ8 466 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 NANOGQ9H9S0 305 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 GPN1Q9HCN4 374 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 DNAJC4Q9NNZ3 241 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 BARHL2Q9NY43 387 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 TMEM9Q9P0T7 183 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 INSL6Q9Y581 213 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SLC22A23A1A5C7 686 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 H3BQ06 376 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-212ENST00000543766 K7EQM0 130 aa8.42□□□□□ -1.06
VPS13D-212ENST00000543766 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms