RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SFXN2Q96NB2 322 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 BTBD9Q96Q07 612 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 HIST1H2AJQ99878 128 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 TMEM204Q9BSN7 226 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 HAUS8Q9BT25 410 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 H2AFJQ9BTM1 129 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 TRAF4Q9BUZ4 470 aaPredicted RBP4.28□□□□□ -1.72
LIMS1-214ENST00000542845 CDADC1Q9BWV3 514 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 NPLQ9BXD5 320 aaPredicted RBP4.28□□□□□ -1.72
LIMS1-214ENST00000542845 PINK1Q9BXM7 581 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 ERVK-6Q9BXR3 956 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 CACNG6Q9BXT2 260 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 AICDAQ9GZX7 198 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 HSD3B7Q9H2F3 369 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 CCDC68Q9H2F9 335 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 UBQLN3Q9H347 655 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 METTL7AQ9H8H3 244 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 FOLH1BQ9HBA9 442 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 CLEC4AQ9UMR7 237 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 ERVK-19Q9WJR5 959 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 PDE10AQ9Y233 779 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.28□□□□□ -1.72
LIMS1-214ENST00000542845 ALPK2Q86TB3 2170 aa4.28□□□□□ -1.72
LIMS1-214ENST00000542845 A0A088AWK7 358 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 TMEM89A2RUT3 159 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 CTAGE9A4FU28 777 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 H0YC42 278 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 CYR61O00622 381 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SEC14L5O43304 696 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 EMC8O43402 210 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ICOSLGO75144 302 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SH3BGRLO75368 114 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 CBR3O75828 277 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 GUCA1CO95843 209 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 PLGP00747 810 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 PROCP04070 461 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SCG5P05408 212 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SERPINA6P08185 405 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 CD8BP10966 210 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 PAMP19021 973 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ZNF10P21506 573 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 HNRNPH1P31943 449 aaKnown RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 AHRP35869 848 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 GNALP38405 381 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SLC6A12P48065 614 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 LHX2P50458 406 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 TERF1P54274 439 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 TPD52P55327 224 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 RPP38P78345 283 aaKnown RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 IRF9Q00978 393 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 BSPH1Q075Z2 132 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SERTAD2Q14140 314 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 RCN2Q14257 317 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 EFTUD2Q15029 972 aaKnown RBP eCLIP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 MLC1Q15049 377 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 RPS6KA2Q15349 733 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SLC18A3Q16572 532 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SGCBQ16585 318 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 NCMAPQ5T1S8 102 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 AGAP6Q5VW22 663 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 OR5M10Q6IEU7 315 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 AAGABQ6PD74 315 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 RINLQ6ZS11 566 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 FKBP9P1Q75LS8 142 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 TMPRSS11BQ86T26 416 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 PEG10Q86TG7 708 aaKnown RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 MFSD4AQ8N468 514 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 MCUQ8NE86 351 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ABHD11Q8NFV4 315 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 NUBPLQ8TB37 319 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 C10orf105Q8TEF2 133 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SLC5A11Q8WWX8 675 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 KRT35Q92764 455 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 PROX1Q92786 737 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 KAT2AQ92830 837 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 NEIL2Q969S2 332 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 S100PBPQ96BU1 408 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 CTHRC1Q96CG8 243 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 C11orf24Q96F05 449 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 TMEM41AQ96HV5 264 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 GPR21Q99679 349 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 MAPKAP1Q9BPZ7 522 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 AIF1LQ9BQI0 150 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 WWTR1Q9GZV5 400 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 METTL17Q9H7H0 456 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ZNF696Q9H7X3 374 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ACTR8Q9H981 624 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 GALNT9Q9HCQ5 603 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 FBXO6Q9NRD1 293 aaPredicted RBP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 FAIMQ9NVQ4 179 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ANO10Q9NW15 660 aa4.27□□□□□ -1.73
LIMS1-214ENST00000542845 ARL15Q9NXU5 204 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms