RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 GPR32P1Q8NGA4 272 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 ZNF675Q8TD23 568 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 GEMIN6Q8WXD5 167 aaKnown RBP10.29□□□□□ -0.76
SCG3-202ENST00000542355 CDS1Q92903 461 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 CCDC74BQ96LY2 380 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 OR6C1Q96RD1 312 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 AMBRA1Q9C0C7 1298 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 SLC7A5P2Q9GIP4 190 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 QRSL1Q9H0R6 528 aaKnown RBP10.29□□□□□ -0.76
SCG3-202ENST00000542355 SMURF2Q9HAU4 748 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 CDV3Q9UKY7 258 aaKnown RBP10.29□□□□□ -0.76
SCG3-202ENST00000542355 CDC14AQ9UNH5 594 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 SAMHD1Q9Y3Z3 626 aaKnown RBP10.29□□□□□ -0.76
SCG3-202ENST00000542355 GPC6Q9Y625 555 aaPredicted RBP10.29□□□□□ -0.76
SCG3-202ENST00000542355 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
SCG3-202ENST00000542355 BDP1A6H8Y1 2624 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HYAL3O43820 417 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 SLITRK5O94991 958 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ANKRD34CP0C6C1 535 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 UBTFL6P0CB48 400 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 CD247P20963 164 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ARHGDIAP52565 204 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HSD17B7P56937 341 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 TXNL4AP83876 142 aaKnown RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 ACY1Q03154 408 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 CHRNEQ04844 493 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 MAP4K2Q12851 820 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 MERTKQ12866 999 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 DAG1Q14118 895 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 GK3PQ14409 553 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCG3-202ENST00000542355 PDK3Q15120 406 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 DUSP5Q16690 384 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 MFSD4BQ5TF39 518 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 MLIPQ5VWP3 458 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 GALNT12Q8IXK2 581 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 OR52R1Q8NGF1 315 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 BBS10Q8TAM1 723 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ZG16BQ96DA0 208 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 LOXL4Q96JB6 756 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 DGAT2Q96PD7 388 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 GFM1Q96RP9 751 aaKnown RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 BARD1Q99728 777 aaKnown RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 REEP1Q9H902 201 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 CXorf21Q9HAI6 301 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ZNF304Q9HCX3 659 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 BCL2L10Q9HD36 194 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 NECTIN3Q9NQS3 549 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 GIN1Q9NXP7 522 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 SMPD3Q9NY59 655 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 LIPT1Q9Y234 373 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 CLDN16Q9Y5I7 305 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ADAMTS9Q9P2N4 1935 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 A0A0G2JPF8 293 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 A8MVJ9 347 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HNRNPCL2B2RXH8 293 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HNRNPCL3B7ZW38 293 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 J3KTA2 159 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HRKO00198 91 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 DSCR3O14972 297 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 FCMRO60667 390 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 SNAP29O95721 258 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 CBX7O95931 251 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 IFNA16P05015 189 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ALPLP05186 524 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 HNRNPCL4P0DMR1 293 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ACP2P11117 423 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 RRM2P31350 389 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 KCNJ5P48544 419 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PDX1P52945 283 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ZIK1Q3SY52 487 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 MINDY4Q4G0A6 757 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PHF19Q5T6S3 580 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 SHQ1Q6PI26 577 aaKnown RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 HIPK1Q86Z02 1210 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 MARVELD2Q8N4S9 558 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 CDRT4Q8N9R6 151 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 RASSF5Q8WWW0 418 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 TFAP2CQ92754 450 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PROX1Q92786 737 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 ZNF354BQ96LW1 612 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PTCHD1Q96NR3 888 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 TRNT1Q96Q11 434 aaKnown RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 NR1H4Q96RI1 486 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 OSBPL10Q9BXB5 764 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 SLC38A1Q9H2H9 487 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PIGUQ9H490 435 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 SOX17Q9H6I2 414 aaPredicted RBP10.28□□□□□ -0.76
SCG3-202ENST00000542355 UBAP1Q9NZ09 502 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 TESMINQ9Y4I5 508 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PCDHGB5Q9Y5G0 923 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 PCDHGA5Q9Y5G8 931 aa10.28□□□□□ -0.76
SCG3-202ENST00000542355 RP1P56715 2156 aa10.27□□□□□ -0.77
SCG3-202ENST00000542355 A0A1B0GX78 115 aa10.27□□□□□ -0.77
SCG3-202ENST00000542355 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
SCG3-202ENST00000542355 HS6ST1O60243 411 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms