RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 HEMK1Q9Y5R4 338 aaPredicted RBP14.33□□□□□ -0.12
DDB1-216ENST00000539739 ANKRD11Q6UB99 2663 aaPredicted RBP14.32□□□□□ -0.12
DDB1-216ENST00000539739 KRT75O95678 551 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 CLPSP04118 112 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 CELA2AP08217 269 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ITGAMP11215 1152 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 PRIM2P49643 509 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 EMDP50402 254 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 CXADRP78310 365 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 RNF4P78317 190 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 Q0VFX4 171 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ZNF155Q12901 538 aaPredicted RBP14.32□□□□□ -0.12
DDB1-216ENST00000539739 ART3Q13508 389 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ZNHIT3Q15649 155 aaPredicted RBP14.32□□□□□ -0.12
DDB1-216ENST00000539739 LRIF1Q5T3J3 769 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ZCCHC12Q6PEW1 402 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 C6orf120Q7Z4R8 191 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 GALNT16Q8N428 558 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 KIF2BQ8N4N8 673 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 SIMC1Q8NDZ2 872 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 NUBPLQ8TB37 319 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 RCN3Q96D15 328 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 MAP10Q9P2G4 905 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 ZNF223Q9UK11 482 aaPredicted RBP14.32□□□□□ -0.12
DDB1-216ENST00000539739 ZMIZ1Q9ULJ6 1067 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 FAF1Q9UNN5 650 aaPredicted RBP14.32□□□□□ -0.12
DDB1-216ENST00000539739 KCNMB2Q9Y691 235 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
DDB1-216ENST00000539739 TPRP12270 2363 aaKnown RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 C2orf92A0A1B0GVN3 265 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 AIM2O14862 343 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 PSMG1O95456 288 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 KRT16P08779 473 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 ESRRAP11474 423 aaPredicted RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 PPIBP23284 216 aaKnown RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 DCAF7P61962 342 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 DUSP8Q13202 625 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 GAB1Q13480 694 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 EBPQ15125 230 aaKnown RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 TRMT5Q32P41 509 aaKnown RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 NCCRP1Q6ZVX7 275 aaPredicted RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 C9orf40Q8IXQ3 194 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 SLC5A8Q8N695 610 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 APOBEC4Q8WW27 367 aaKnown RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 ROPN1LQ96C74 230 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 NEURL3Q96EH8 262 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 NSL1Q96IY1 281 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 SLC35G5Q96KT7 338 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 GAL3ST4Q96RP7 486 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 IL1RL2Q9HB29 575 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 FOLH1BQ9HBA9 442 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 EQTNQ9NQ60 294 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 TBCCD1Q9NVR7 557 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 SLAMF8Q9P0V8 285 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.31□□□□□ -0.12
DDB1-216ENST00000539739 TEKT2Q9UIF3 430 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 L3MBTL1Q9Y468 752 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 DMXL2Q8TDJ6 3036 aa14.31□□□□□ -0.12
DDB1-216ENST00000539739 A8MUI8 341 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 SOX30O94993 753 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 HMGN2P05204 90 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 PTPN6P29350 595 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CCL11P51671 97 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 SOX8P57073 446 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CHAF1BQ13112 559 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 LASP1Q14847 261 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 DLEU7Q6UYE1 221 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CLEC4FQ8N1N0 589 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 AMER2Q8N7J2 671 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CDRT4Q8N9R6 151 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 BRIX1Q8TDN6 353 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 ZFP90Q8TF47 636 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 THAP3Q8WTV1 239 aaPredicted RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 CGREF1Q99674 301 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ACTRT3Q9BYD9 372 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 WWTR1Q9GZV5 400 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 RAD21L1Q9H4I0 556 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 TPT1P8Q9HAU6 139 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 SLC6A13Q9NSD5 602 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ACACBO00763 2458 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 PCSK5Q92824 1860 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 A6NL46 340 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 EVPLLA8MZ36 301 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CLIC1O00299 241 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 PRKNO60260 465 aaPredicted RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 CBX6O95503 412 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 NQO1P15559 274 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 MATN1P21941 496 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CALB2P22676 271 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 PPICP45877 212 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ANXA11P50995 505 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 TXNL4AP83876 142 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 GTDC1Q4AE62 458 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 SAXO2Q658L1 398 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 MFSD12Q6NUT3 480 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 H3F3CQ6NXT2 135 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms