RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KHKP50053 298 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 REEP5Q00765 189 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 DPTQ07507 201 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TSPAN31Q12999 210 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 GNA13Q14344 377 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 P2RY14Q15391 338 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 RASSF6Q6ZTQ3 369 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TRILQ7L0X0 811 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 UBE3DQ7Z6J8 389 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 C11orf96Q7Z7L8 435 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 DCUN1D3Q8IWE4 304 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 POGLUT1Q8NBL1 392 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TMEM145Q8NBT3 493 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CD99L2Q8TCZ2 262 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 UCN3Q969E3 161 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 NUS1Q96E22 293 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SENP5Q96HI0 755 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 AMDHD1Q96NU7 426 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 GTPBP2Q9BX10 602 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 PINK1Q9BXM7 581 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PRRG3Q9BZD7 231 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PCBD2Q9H0N5 130 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 GLIPR2Q9H4G4 154 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 DDX31Q9H8H2 851 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 B3GAT2Q9NPZ5 323 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TDP1Q9NUW8 608 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CUEDC1Q9NWM3 386 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TEX10Q9NXF1 929 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 MARK1Q9P0L2 795 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TAC3Q9UHF0 121 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CLCA2Q9UQC9 943 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 ASB4Q9Y574 426 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CCDC85CA6NKD9 419 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 KPNA3O00505 521 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 CPNE3O75131 537 aaKnown RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 LALBAP00709 142 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CHRM4P08173 479 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 DDX6P26196 483 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH13-204ENST00000539548 CD79BP40259 229 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ANXA11P50995 505 aaKnown RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 ABATP80404 500 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ZNF155Q12901 538 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 RPA4Q13156 261 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TMEM44Q2T9K0 475 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 WSCD2Q2TBF2 565 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 PRAMEF8Q5VWM4 474 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 PRAMEF7Q5VXH5 474 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 RAET1GQ6H3X3 334 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 OR4C11Q6IEV9 310 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 OLIG3Q7RTU3 272 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 PRICKLE2Q7Z3G6 844 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 LHFPL3Q86UP9 236 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 MARCH9Q86YJ5 346 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CADM2Q8N3J6 435 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 KREMEN2Q8NCW0 462 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 OR8D4Q8NGM9 314 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 SUN3Q8TAQ9 357 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TTC9Q92623 222 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TFGQ92734 400 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 RFKQ969G6 155 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 C11orf49Q9H6J7 331 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ZCCHC3Q9NUD5 404 aaKnown RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 HCFC1R1Q9NWW0 138 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ING3Q9NXR8 418 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 NLKQ9UBE8 527 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ADAM30Q9UKF2 790 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 EXOGQ9Y2C4 368 aaKnown RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 GPR52Q9Y2T5 361 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 FEZF1A0PJY2 475 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 FAM170BA6NMN3 283 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 GABRPO00591 440 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CCL16O15467 120 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CHST10O43529 356 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 AKAP8O43823 692 aaKnown RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 ORC5O43913 435 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 SLC19A2O60779 497 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 GALP22466 123 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 CA8P35219 290 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 SOX18P35713 384 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 BUD31P41223 144 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 RGS19P49795 217 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 RAB25P57735 213 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ARPC4P59998 168 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 RRAS2P62070 204 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 MLLT1Q03111 559 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 MADCAM1Q13477 382 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 IL18Q14116 193 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 DSG2Q14126 1118 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TRAM2Q15035 370 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 AADACL4Q5VUY2 407 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TMEM64Q6YI46 380 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 TMCO2Q7Z6W1 182 aaPredicted RBP9.09□□□□□ -0.95
CDH13-204ENST00000539548 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ZNF366Q8N895 744 aa9.09□□□□□ -0.95
CDH13-204ENST00000539548 ZFP41Q8N8Y5 198 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms