RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LRRC56Q8IYG6 542 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ZBTB44Q8NCP5 570 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 HSD17B8Q92506 261 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ALG14Q96F25 216 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 CXorf36Q9H7Y0 433 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 SCP2D1Q9UJQ7 156 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 GPR171O14626 319 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 EEF1E1O43324 174 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SGTAO43765 313 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 EFCAB14O75071 495 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 CFDP00746 253 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 CSNK1DP48730 415 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 ENTPD8Q5MY95 495 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 HBMQ6B0K9 141 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 RSPO2Q6UXX9 243 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 RFLNAQ6ZTI6 216 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 IKBIPQ70UQ0 350 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 MS4A15Q8N5U1 240 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 WBP2Q969T9 261 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 KLHL15Q96M94 604 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 WFDC6Q9BQY6 131 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 KCMF1Q9P0J7 381 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 KIF25Q9UIL4 384 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 LOC105369274A0A096LPK9 316 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 ZNF197O14709 1029 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SULT1A3P0DMM9 295 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SULT1A4P0DMN0 295 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 PEPDP12955 493 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 PRKACAP17612 351 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SERPINA4P29622 427 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 ACSL1P33121 698 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 PTSQ03393 145 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 ZNF155Q12901 538 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 CLLU1OSQ5K130 101 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 EOGTQ5NDL2 527 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 NDUFAF5Q5TEU4 345 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 C1orf94Q6P1W5 598 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SLCO4C1Q6ZQN7 724 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 OR4N4Q8N0Y3 316 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 POGLUT1Q8NBL1 392 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 OR56A3Q8NH54 315 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 WDR48Q8TAF3 677 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 NEURL3Q96EH8 262 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 TMEM175Q9BSA9 504 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC6A16Q9GZN6 736 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 DLL4Q9NR61 685 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 COPZ2Q9P299 210 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 GPR52Q9Y2T5 361 aa17.53■□□□□ 0.4
SFSWAP-207ENST00000538548 KDM4EB2RXH2 506 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 FOXE1O00358 373 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SLCO2B1O94956 709 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 MMP12P39900 470 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 MTNR1BP49286 362 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC27A4Q6P1M0 643 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 B3GLCTQ6Y288 498 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 TMPRSS11BQ86T26 416 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 IQCHQ86VS3 1027 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 NR2C2APQ86WQ0 139 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 NEIL2Q969S2 332 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SCRN2Q96FV2 425 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 GPA33Q99795 319 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 PLA2G12AQ9BZM1 189 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 ICKQ9UPZ9 632 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 FAM170BA6NMN3 283 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 M0R233 179 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SAP18O00422 153 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 EIF4EP06730 217 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 ACSM4P0C7M7 580 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 GSTM3P21266 225 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC6A11P48066 632 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SPDYE7PQ495Y7 208 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 VASNQ6EMK4 673 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 BHLHB9Q6PI77 547 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 MRGPREQ86SM8 312 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 KLHL36Q8N4N3 616 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 ADAMTS14Q8WXS8 1223 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 KCTD12Q96CX2 325 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 WBP1Q96G27 269 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 C2orf49Q9BVC5 232 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 FNDC11Q9BVV2 318 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 SEC14L3Q9UDX4 400 aa17.52■□□□□ 0.4
SFSWAP-207ENST00000538548 A0A1W2PRG6 482 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 hCG_1807616A0A1W2PRN6 198 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 KLHL18O94889 574 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC16A8O95907 504 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 IMPA1P29218 277 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 BTN1A1Q13410 526 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 FGD2Q7Z6J4 655 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 GPR135Q8IZ08 494 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 TEX47Q8TBZ9 253 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 WFDC5Q8TCV5 224 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC38A2Q96QD8 506 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF607Q96SK3 696 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 RBCK1Q9BYM8 510 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 GPR62Q9BZJ7 368 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 BTBD1Q9H0C5 482 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms