RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PARP16Q8N5Y8 322 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 FAM83FQ8NEG4 500 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 MOAP1Q96BY2 351 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 SCARF2Q96GP6 870 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 LRR1Q96L50 414 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 KCNS3Q9BQ31 491 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 C3orf14Q9HBI5 128 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 OR6C2Q9NZP2 312 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 ZNF624Q9P2J8 865 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 ZNF229Q9UJW7 825 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 TAF4O00268 1085 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 WWP2O00308 870 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 CASC3O15234 703 aaKnown RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 GTF2E2P29084 291 aaKnown RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 TGM3Q08188 693 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 ATAT1Q5SQI0 421 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 C6orf132Q5T0Z8 1188 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 PAQR7Q86WK9 346 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 CADM3Q8N126 398 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 NKX2-4Q9H2Z4 354 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 A0A087WUU8 490 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 FCMRO60667 390 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 KLF8O95600 359 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 HBQ1P09105 142 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 NR2F6P10588 404 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 AVPR1BP47901 424 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 MLLT1Q03111 559 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 OCLNQ16625 522 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 SYT14P1Q58G82 188 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 STEAP3Q658P3 488 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 CD300LDQ6UXZ3 194 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 C16orf62Q7Z3J2 963 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 KIF18BQ86Y91 864 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 FAM131CQ96AQ9 280 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 TRNT1Q96Q11 434 aaKnown RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 POLDIP3Q9BY77 421 aaKnown RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 SRMSQ9H3Y6 488 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 SLC13A4Q9UKG4 626 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 KDM1AO60341 852 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 ALPPP05187 535 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 ALOX5P09917 674 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 SOX6P35712 828 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 NRROSQ86YC3 692 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 SIMC1Q8NDZ2 872 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 ZCCHC10Q8TBK6 192 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 CDCA3Q99618 268 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 GABRG3Q99928 467 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 MND1Q9BWT6 205 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 POLR2J2Q9GZM3 115 aaKnown RBP23.37■■□□□ 1.33
RAB40C-204ENST00000538492 CNIH4Q9P003 139 aa23.37■■□□□ 1.33
RAB40C-204ENST00000538492 APOL3O95236 402 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 TSFMP43897 325 aaKnown RBP23.36■■□□□ 1.33
RAB40C-204ENST00000538492 MAP4K2Q12851 820 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 SNAPC1Q16533 368 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 NDUFA9Q16795 377 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 TMEM31Q5JXX7 168 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 PPP2R2DQ66LE6 453 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 FAM111BQ6SJ93 734 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 KLHL25Q9H0H3 589 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 POLMQ9NP87 494 aaPredicted RBP23.36■■□□□ 1.33
RAB40C-204ENST00000538492 CAB39Q9Y376 341 aaPredicted RBP23.36■■□□□ 1.33
RAB40C-204ENST00000538492 EGFP01133 1207 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 MAGP20916 626 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 ACTR1BP42025 376 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 ACTR1AP61163 376 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 HYAL1Q12794 435 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 TUBA3EQ6PEY2 450 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 OR4N5Q8IXE1 308 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 FAM26EQ8N5C1 309 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 NANOGP1Q8N7R0 232 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 HTRA1Q92743 480 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 NUAK2Q9H093 628 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 TMEM168Q9H0V1 697 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 MIR1-1HGQ9H1L0 117 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 SEMA4GQ9NTN9 838 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 CFL2Q9Y281 166 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 NTNG1Q9Y2I2 539 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 GPR52Q9Y2T5 361 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 CHST2Q9Y4C5 530 aa23.36■■□□□ 1.33
RAB40C-204ENST00000538492 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 ZIC2O95409 532 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-204ENST00000538492 MAGEA8P43361 318 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 ARFIP1P53367 373 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 PRICKLE2Q7Z3G6 844 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 ASPGQ86U10 573 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 GIMAP5Q96F15 307 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 SIPA1Q96FS4 1042 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 KLF15Q9UIH9 416 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 MKLN1Q9UL63 735 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 USP34Q70CQ2 3546 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 MYL12BO14950 172 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 CYP7B1O75881 506 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 PDX1P52945 283 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 CDK5Q00535 292 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 ENTPD8Q5MY95 495 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 LINC00471Q8N535 108 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 SLC16A11Q8NCK7 471 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 OR7G2Q8NG99 324 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 GAL3ST3Q96A11 431 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 TRMT61AQ96FX7 289 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms