RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PKDCCQ504Y2 493 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MAMDC2Q7Z304 686 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TIGD4Q8IY51 512 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR8S1Q8NH09 359 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FCGR1BQ92637 280 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HS6ST2Q96MM7 605 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 IRF2BPLQ9H1B7 796 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TOR3AQ9H497 397 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SP140LQ9H930 580 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR6C2Q9NZP2 312 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ERVK-18Q9QC07 812 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MCTS1Q9ULC4 181 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 SLC7A7Q9UM01 511 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PCDHGB2Q9Y5G2 931 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 A0A0G2JPF8 293 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 HNRNPCL3B7ZW38 293 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 H0Y8X5 98 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 EIF3FO00303 357 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 NUAK1O60285 661 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ENTPD6O75354 484 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MT-ND5P03915 603 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 HNRNPCL4P0DMR1 293 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 UBL4AP11441 157 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CLCN2P51788 898 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FOXC1Q12948 553 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 GPR18Q14330 331 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MBTPS1Q14703 1052 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SWI5Q1ZZU3 235 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 TRNP1Q6NT89 227 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 TRAPPC6BQ86SZ2 158 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 TMEM17Q86X19 198 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 GALNT6Q8NCL4 622 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ZNF548Q8NEK5 533 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 BMFQ96LC9 184 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MTHFD2LQ9H903 347 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 RXFP3Q9NSD7 469 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 DHCR7Q9UBM7 475 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 KLHL21Q9UJP4 597 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 G3V3Y1 287 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 AREL1O15033 823 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 EDIL3O43854 480 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 AOAHP28039 575 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 APLNRP35414 380 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ACVR1BP36896 505 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ADPRHP54922 357 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FOXA1P55317 472 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ASB18Q6ZVZ8 466 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SNX29P2Q8IUI4 249 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 GID4Q8IVV7 300 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CCDC74AQ96AQ1 378 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 RTP4Q96DX8 246 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FBXL20Q96IG2 436 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MBNL1Q9NR56 388 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 FAM171A2A8MVW0 826 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 GNG2P59768 71 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CTXN1P60606 82 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SLC36A3Q495N2 470 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 DCST2Q5T1A1 773 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 C9orf135Q5VTT2 229 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 KIAA1614Q5VZ46 1190 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SSX6Q7RTT6 188 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 UBE2Q1Q7Z7E8 422 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 UBALD2Q8IYN6 164 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ARRDC2Q8TBH0 407 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ZNF480Q8WV37 535 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ADOQ96SZ5 270 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MROQ9BYG7 248 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ENY2Q9NPA8 101 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FBXO9Q9UK97 447 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 CLEC4EQ9ULY5 219 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 DHDHQ9UQ10 334 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 DNAJC15Q9Y5T4 150 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SULT2B1O00204 365 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ZFAND5O76080 213 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 H6PDO95479 791 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ATXN1LP0C7T5 689 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 DDCP20711 480 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 GCGRP47871 477 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MAP4K2Q12851 820 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 DSG2Q14126 1118 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 TSC22D1Q15714 1073 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SMAD2Q15796 467 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 UNQ6126/PRO20091Q6UXV3 157 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FRMD1Q8N878 549 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 OR4K13Q8NH42 304 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 FGF14Q92915 247 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 PDXPQ96GD0 296 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 METTL8Q9H825 291 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 C2orf42Q9NWW7 574 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MMP17Q9ULZ9 603 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 YBX2Q9Y2T7 364 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 PAPPAQ13219 1627 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 L7N2F9 121 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 PPP1R3DO95685 299 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 ADH7P40394 386 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 VAMP2P63027 116 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 HYAL1Q12794 435 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 C4orf46Q504U0 113 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms