RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TMEM35AQ53FP2 167 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 ARTNQ5T4W7 220 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 HIST3H2AQ7L7L0 130 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 MDGA2Q7Z553 956 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 LUZP2Q86TE4 346 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 STK32CQ86UX6 486 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 COMMD2Q86X83 199 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 BEST3Q8N1M1 668 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 POMGNT2Q8NAT1 580 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 OR5L2Q8NGL0 311 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 OR51A7Q8NH64 312 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SLC2A12Q8TD20 617 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 HIST1H2ACQ93077 130 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SEC61A2Q9H9S3 476 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 POU2F3Q9UKI9 436 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 TMCC3Q9ULS5 477 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PPT2Q9UMR5 302 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 GTF3C1Q12789 2109 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SHANK1Q9Y566 2161 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 TPP2P29144 1249 aaPredicted RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 AHRP35869 848 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 REEP5Q00765 189 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 LIPEQ05469 1076 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 DUSP2Q05923 314 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 BNIP2Q12982 314 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PAGE3Q5JUK9 113 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PRMT9Q6P2P2 845 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 GFRALQ6UXV0 394 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 MED25Q71SY5 747 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 OR11G2Q8NGC1 345 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 TM9SF4Q92544 642 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 GTPBP3Q969Y2 492 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 TM4SF18Q96CE8 201 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SGPP1Q9BX95 441 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SLC29A3Q9BZD2 475 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 ITGB1BP2Q9UKP3 347 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 ZFC3H1O60293 1989 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 SH3D21A4FU49 640 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TARM1B6A8C7 271 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 UNC5CO95185 931 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CXCR1P25024 350 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SQLEQ14534 574 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 LARS2Q15031 903 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 SLC35F1Q5T1Q4 408 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 FAM180AQ6UWF9 173 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 GALNT5Q7Z7M9 940 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 PACS2Q86VP3 889 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 FITM2Q8N6M3 262 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SLC22A8Q8TCC7 542 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 NKD1Q969G9 470 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 OR5B2Q96R09 309 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TXLNGYQ9BZA5 131 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 DSN1Q9H410 356 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 GLIPR2Q9H4G4 154 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 PTGES2Q9H7Z7 377 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 MRTO4Q9UKD2 239 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 TMCO1Q9UM00 188 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CSAG2Q9Y5P2 127 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 PNMA8CA0A1B0GUJ8 204 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CIB4A0PJX0 185 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 FAM90A27PA6NNH2 459 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 ZNF891A8MT65 544 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 PROM1O43490 865 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 NSA2O95478 260 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 SOX3P41225 446 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CDKN2CP42773 168 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SSR4P51571 173 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SOX8P57073 446 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 DSTNP60981 165 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 GMFBP60983 142 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 DSG2Q14126 1118 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 IGFBP7Q16270 282 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 KLHL12Q53G59 568 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 ACER2Q5QJU3 275 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 DCAF10Q5QP82 559 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 PDZK1Q5T2W1 519 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 GCNT6Q5T4J0 391 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TMEM225Q6GV28 225 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 WDR74Q6RFH5 385 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 MRGPREQ86SM8 312 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CLEC14AQ86T13 490 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 KBTBD2Q8IY47 623 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 C16orf52Q8NHV5 167 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CPT1CQ8TCG5 803 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CNRIP1Q96F85 164 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 PDLIM5Q96HC4 596 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 NUDT9Q9BW91 350 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SAR1AQ9NR31 198 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TAGLN3Q9UI15 199 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 IGHV3-15A0A0B4J1V0 119 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 IGHV3-64DA0A0J9YX35 117 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 M0R3H8 397 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms