RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	GJA1	P17302	382 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CSRP1	P21291	193 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PSMA1	P25786	263 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	APEX1	P27695	318 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC1A3	P43003	542 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DGKE	P52429	567 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CCL23	P55773	120 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DEFA1	P59665	94 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DEFA3	P59666	94 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ERVK-21	P61565	698 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CSNK1G2	P78368	415 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DEFB103A	P81534	67 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TSPAN31	Q12999	210 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DDX39B	Q13838	428 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	C2orf27A	Q580R0	203 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ATAT1	Q5SQI0	421 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CNKSR3	Q6P9H4	555 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	GHDC	Q8N2G8	530 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SIRT6	Q8N6T7	355 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OR4K5	Q8NGD3	323 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OR5AR1	Q8NGP9	310 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	C17orf50	Q8WW18	174 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CNRIP1	Q96F85	164 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	LRR1	Q96L50	414 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TTYH2	Q9BSA4	534 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PINK1	Q9BXM7	581 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TIGAR	Q9NQ88	270 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CYSLTR2	Q9NS75	346 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	MED17	Q9NVC6	651 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC25A13	Q9UJS0	675 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	RAB23	Q9ULC3	237 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ADAMTS20	P59510	1910 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	GNG14	A0A1W2PPG7	69 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PPM1D	O15297	605 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	MYL9	P24844	172 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	FPR3	P25089	353 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DDX6	P26196	483 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	EVI2B	P34910	448 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	MAPK12	P53778	367 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PPP3R1	P63098	170 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	EEF1A1	P68104	462 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	HTRA4	P83105	476 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	NFE2L1	Q14494	772 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SNAP47	Q5SQN1	464 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DCST1	Q5T197	706 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SMARCD3	Q6STE5	483 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	WDR88	Q6ZMY6	472 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OLIG3	Q7RTU3	272 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	YIPF7	Q8N8F6	280 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TEX19	Q8NA77	164 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ATP6V1C2	Q8NEY4	427 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OR5D16	Q8NGK9	328 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TMEM159	Q96B96	161 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ZG16B	Q96DA0	208 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ASIC4	Q96FT7	647 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SCARF2	Q96GP6	870 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TM9SF2	Q99805	663 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TMEM246	Q9BRR3	403 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	POLR2J2	Q9GZM3	115 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SAP130	Q9H0E3	1048 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OR51I1	Q9H343	314 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TMEM39A	Q9NV64	488 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	IMPAD1	Q9NX62	359 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	EIF3K	Q9UBQ5	218 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	LSM7	Q9UK45	103 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ICAM5	Q9UMF0	924 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SNX8	Q9Y5X2	465 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	FANCM	Q8IYD8	2048 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	LINC00862	A6NCI5	91 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	OTOL1	A6NHN0	477 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	WASHC1	A8K0Z3	465 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897		A8MV72	311 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	LEUTX	A8MZ59	168 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CDC42EP2	O14613	210 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	AKAP8	O43823	692 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	RNGTT	O60942	597 aa	Known RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SH3BGRL	O75368	114 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	HSMCR30	P0CW71	290 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ACP5	P13686	325 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TEAD1	P28347	426 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	HTR1F	P30939	366 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	BTG1	P62324	171 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SP3	Q02447	781 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	SCN1B	Q07699	218 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ENPP2	Q13822	863 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	DECR1	Q16698	335 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	TATDN3	Q17R31	274 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ZFP69	Q49AA0	526 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PRAMEF14	Q5SWL7	426 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PRAMEF13	Q5VWM6	474 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF620	Q6ZNG0	422 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	GLRX5	Q86SX6	157 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	PLCZ1	Q86YW0	608 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	BBS10	Q8TAM1	723 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CYB5D2	Q8WUJ1	264 aa		4.14	□□□□□ -1.75

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