RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 HMGB2P26583 209 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 EPHA8P29322 1005 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 DDTP30046 118 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 EPHX2P34913 555 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MPIP34949 423 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 AHRP35869 848 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CAPZBP47756 277 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 NT5C2P49902 561 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ELLP55199 621 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 MAZP56270 477 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 NKX6-1P78426 367 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 FAM189BP81408 668 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 DGCR2P98153 550 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 VLDLRP98155 873 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CDKL1Q00532 357 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MC1RQ01726 317 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SLC18A2Q05940 514 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ELP6Q0PNE2 266 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MAD2L1Q13257 205 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 IL18Q14116 193 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PIGHQ14442 188 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 KRT33BQ14525 404 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 HEPACAMQ14CZ8 416 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TMED2Q15363 201 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SLC1A5Q15758 541 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CHI3L2Q15782 390 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CTF1Q16619 201 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 DECR1Q16698 335 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 BSXQ3C1V8 233 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ACTBL2Q562R1 376 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 LRIF1Q5T3J3 769 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 C9orf135Q5VTT2 229 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 NKAIN2Q5VXU1 208 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 B3GNTL1Q67FW5 361 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 LAMTOR1Q6IAA8 161 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 JADE1Q6IE81 842 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TAPT1Q6NXT6 567 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CYHR1Q6ZMK1 362 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 KCTD8Q6ZWB6 473 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PLPPR4Q7Z2D5 763 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PAGE2Q7Z2X7 111 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 LHFPL4Q7Z7J7 247 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SERINC5Q86VE9 423 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FAM90A1Q86YD7 464 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 NAXDQ8IW45 347 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ADHFE1Q8IWW8 467 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FAM71AQ8IYT1 594 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 AMER2Q8N7J2 671 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ZNF283Q8N7M2 679 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FBXO36Q8NEA4 188 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 BPIFB6Q8NFQ5 453 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 OR2M7Q8NG81 312 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 OR5M1Q8NGP8 315 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 OR56A3Q8NH54 315 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 C9orf43Q8TAL5 461 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 BBS10Q8TAM1 723 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ADAMTS15Q8TE58 950 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ZFP90Q8TF47 636 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 LCN9Q8WX39 176 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 LARP4BQ92615 738 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 MUL1Q969V5 352 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 KIAA1143Q96AT1 154 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 MRPL38Q96DV4 380 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 LINGO1Q96FE5 620 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SLC35A4Q96G79 324 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ZNF668Q96K58 619 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TEFMQ96QE5 360 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 CPXM1Q96SM3 734 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CPNE1Q99829 537 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ADAM2Q99965 735 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TUBGCP2Q9BSJ2 902 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 NAT9Q9BTE0 207 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 HDHD5Q9BXW7 423 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SLIRPQ9GZT3 109 aaKnown RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SEMA6AQ9H2E6 1030 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 GSTO2Q9H4Y5 243 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 REEP4Q9H6H4 257 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 NT5DC2Q9H857 520 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MYNNQ9NPC7 610 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PLSCR3Q9NRY6 295 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ACSS1Q9NUB1 689 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 NLGN3Q9NZ94 848 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SPG21Q9NZD8 308 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 GRHL1Q9NZI5 618 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CALML5Q9NZT1 146 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PISDQ9UG56 409 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SLC25A13Q9UJS0 675 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 OSGIN1Q9UJX0 560 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FEM1BQ9UK73 627 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TBX20Q9UMR3 447 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 RPH3ALQ9UNE2 315 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 STUB1Q9UNE7 303 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FBXO7Q9Y3I1 522 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MMACHCQ9Y4U1 282 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SPATA31A6Q5VVP1 1343 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 KIAA1217Q5T5P2 1943 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TANC1Q9C0D5 1861 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms