RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NDUFA9Q16795 377 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 HKDC1Q2TB90 917 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZNF468Q5VIY5 522 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 GALNT18Q6P9A2 607 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 B3GNT6Q6ZMB0 384 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 GK5Q6ZS86 529 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 COMMD6Q7Z4G1 85 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SNX32Q86XE0 403 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR9I1Q8NGQ6 314 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 CLHC1Q8NHS4 586 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 RP9Q8TA86 221 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 NT5CQ8TCD5 201 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 RERGQ96A58 199 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SECISBP2Q96T21 854 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SORBS1Q9BX66 1292 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 EBPLQ9BY08 206 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 DPY30Q9C005 99 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 REXO4Q9GZR2 422 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 TMEM45AQ9NWC5 275 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 B4GALT7Q9UBV7 327 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 Q9UFV3 132 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR14I1A6ND48 311 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 B2RBV5 119 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 C9JVG2 144 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 NPIPA2E9PIF3 369 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 NPIPA3F8WFD2 350 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 H0YIG0 161 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 RTCAO00442 366 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PLPP1O14494 284 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 BCKDKO14874 412 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PEX1O43933 1283 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PCDH7O60245 1069 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 EEDO75530 441 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 GOSR1O95249 250 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 GBAP04062 536 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 ANXA4P09525 319 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 GLI4P10075 376 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PCSK2P16519 638 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 CALB2P22676 271 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 TIA1P31483 386 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 TRHRP34981 398 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 BSGP35613 385 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 RFC3P40938 356 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 CPA2P48052 419 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 POLR2JP52435 117 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PLA2G16P53816 162 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 HNRNPH2P55795 449 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 RGS1Q08116 209 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PWP1Q13610 501 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PTGR1Q14914 329 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 MAPRE2Q15555 327 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 ADPRMQ3LIE5 342 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR4C11Q6IEV9 310 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PAPD4Q6PIY7 484 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 WDR53Q7Z5U6 358 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF227Q86WZ6 799 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 LIX1LQ8IVB5 337 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 P3H2Q8IVL5 708 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM9CQ8IZT9 166 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 KRTCAP2Q8N6L1 136 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZFP62Q8NB50 900 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 CAMKVQ8NCB2 501 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 MS4A6EQ96DS6 147 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 EGLN2Q96KS0 407 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 QRFPRQ96P65 431 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 TSSK3Q96PN8 268 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZBTB18Q99592 522 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 CENPKQ9BS16 269 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PLEKHF2Q9H8W4 249 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 PNPLA3Q9NST1 481 aa10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
TRAPPC4-213ENST00000533149 A0A0G2JN53 185 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 GNG14A0A1W2PPG7 69 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 NR5A2O00482 541 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 P2RX6O15547 441 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ERI3O43414 337 aaKnown RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 AKAP10O43572 662 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 SMIM10L1P0DMW3 83 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 CD53P19397 219 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 MNAT1P51948 309 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 NCALDP61601 193 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 STXBP1P61764 594 aaKnown RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 TGM3Q08188 693 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 STX5Q13190 355 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 VPS26BQ4G0F5 336 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 SFT2D3Q587I9 215 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 Q5PR19 223 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 CCNYL2Q5T2Q4 361 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF585AQ6P3V2 769 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ABHD17CQ6PCB6 329 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 C16orf47Q6ZP98 133 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 RINLQ6ZS11 566 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 PAGE2Q7Z2X7 111 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 CIARTQ8N365 385 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 KCT2Q8NC54 265 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms