RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KLHL22Q53GT1 634 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 FAM46DQ8NEK8 389 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 OR52P1PQ8NH57 321 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ST8SIA4Q92187 359 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 TSSK6Q9BXA6 273 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 C1QTNF3Q9BXJ4 246 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF334Q9HCZ1 680 aaPredicted RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ELOVL2Q9NXB9 296 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 IKZF2Q9UKS7 526 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 CCL26Q9Y258 94 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 PCDHGA2Q9Y5H1 932 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 OR5K3A6NET4 321 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 CACNB4O00305 520 aaPredicted RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF30P17039 623 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 DNASE1P24855 282 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 HLA-FP30511 346 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 HSF2Q03933 536 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 SLC3A1Q07837 685 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 GINS1Q14691 196 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 LSM14AQ8ND56 463 aaKnown RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ABCG5Q9H222 651 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 MIXL1Q9H2W2 232 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 NUDT15Q9NV35 164 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 HCN2Q9UL51 889 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 PPT2Q9UMR5 302 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 MAB21L2Q9Y586 359 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ARHGEF33A8MVX0 844 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 NCR1O76036 304 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 RAF1P04049 648 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 RPL35P42766 123 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 BTN3A2P78410 334 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 EXOSC2Q13868 293 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 B3GLCTQ6Y288 498 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 GDPGP1Q6ZNW5 385 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 GEMIN6Q8WXD5 167 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 SLC25A46Q96AG3 418 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 HCN3Q9P1Z3 774 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 DRGXA6NNA5 263 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 TSPAN12O95859 305 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 ETV1P50549 477 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 MAP4K2Q12851 820 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 EIF2B5Q13144 721 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 SLC9A5Q14940 896 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 MICAQ29983 383 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 RBPMSQ93062 196 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 RERGQ96A58 199 aaPredicted RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 NARS2Q96I59 477 aaKnown RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 PIGUQ9H490 435 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 REEP4Q9H6H4 257 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 KRCC1Q9NPI7 259 aaPredicted RBP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 SLAMF7Q9NQ25 335 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 TRPS1Q9UHF7 1281 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 MGAMO43451 1857 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 CHURC1-FNTBB4DL54 471 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 M0R233 179 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 M0R3H8 397 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 SDHBP21912 280 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 CRISP1P54107 249 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 CTBP2P56545 445 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.94■□□□□ 0.3
LTBP3-210ENST00000528516 SBSNQ6UWP8 590 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 ASB12Q8WXK4 309 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 IFT27Q9BW83 186 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 CDCA4Q9BXL8 241 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 FOLH1BQ9HBA9 442 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 TMEM138Q9NPI0 162 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
LTBP3-210ENST00000528516 HYKKA2RU49 373 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 VSX2P58304 361 aaPredicted RBP16.93■□□□□ 0.3
LTBP3-210ENST00000528516 PPP3R1P63098 170 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 LRIF1Q5T3J3 769 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 MZT2AQ6P582 158 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 ENPP7Q6UWV6 458 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 KLHDC8BQ8IXV7 354 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 BEST4Q8NFU0 473 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 OR5D16Q8NGK9 328 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 OR5AR1Q8NGP9 310 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 ARSGQ96EG1 525 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 SLC46A2Q9BY10 475 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 RPL36Q9Y3U8 105 aaKnown RBP16.93■□□□□ 0.3
LTBP3-210ENST00000528516 GABRR3A8MPY1 467 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 MARCH9Q86YJ5 346 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 SLAIN1Q8ND83 568 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 OR9A1PQ8NGU1 263 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 MAPKAP1Q9BPZ7 522 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 SLC35C2Q9NQQ7 365 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 CNOT2Q9NZN8 540 aaKnown RBP16.93■□□□□ 0.3
LTBP3-210ENST00000528516 NDUFAF4Q9P032 175 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 SCML1Q9UN30 329 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 PCDHB11Q9Y5F2 797 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 KLK8O60259 260 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 SLC43A1O75387 559 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 TYRP1P17643 537 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 CFL1P23528 166 aaKnown RBP16.93■□□□□ 0.3
LTBP3-210ENST00000528516 MAP2K6P52564 334 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 EPHA5P54756 1037 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 XKR4Q5GH76 650 aa16.93■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF782Q6ZMW2 699 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms