RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
CAPN1-215ENST00000528396 ANKRA2Q9H9E1 313 aa12.32□□□□□ -0.44
CAPN1-215ENST00000528396 IL1RL2Q9HB29 575 aa12.32□□□□□ -0.44
CAPN1-215ENST00000528396 FOLH1BQ9HBA9 442 aa12.32□□□□□ -0.44
CAPN1-215ENST00000528396 NOP53Q9NZM5 478 aaKnown RBP12.32□□□□□ -0.44
CAPN1-215ENST00000528396 SUCOQ9UBS9 1254 aaKnown RBP12.32□□□□□ -0.44
CAPN1-215ENST00000528396 EXO1Q9UQ84 846 aaKnown RBP12.32□□□□□ -0.44
CAPN1-215ENST00000528396 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 A0A087WV62 115 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 FRG2CA6NGY1 282 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 TBX19O60806 448 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 REM1O75628 298 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 PDE9AO76083 593 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 STSP08842 583 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ESRRAP11474 423 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 PRPS1L1P21108 318 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 MRPS22P82650 360 aaKnown RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 EMX2Q04743 252 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 LYPD8Q6UX82 237 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ZNF551Q7Z340 670 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 SLC44A2Q8IWA5 706 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 SLC34A3Q8N130 599 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 DYDC1Q8WWB3 177 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ARL8AQ96BM9 186 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ZNF597Q96LX8 424 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 BTBD9Q96Q07 612 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 SECISBP2Q96T21 854 aaKnown RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 SORT1Q99523 831 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 NUF2Q9BZD4 464 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ACBD3Q9H3P7 528 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 LDAHQ9H6V9 325 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 EXO5Q9H790 373 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 C3orf14Q9HBI5 128 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 ZFP64Q9NPA5 681 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 PNPOQ9NVS9 261 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 TUBA8Q9NY65 449 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 KLRF1Q9NZS2 232 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 C19orf53Q9UNZ5 99 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 MAPRE3Q9UPY8 281 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 GPR55Q9Y2T6 319 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-215ENST00000528396 RELNP78509 3460 aa12.31□□□□□ -0.44
CAPN1-215ENST00000528396 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PLOD2O00469 737 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PRRG2O14669 202 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ABCB7O75027 752 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SNX4O95219 450 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ABCB1P08183 1280 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-215ENST00000528396 KITP10721 976 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PTGS2P35354 604 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PRKAG1P54619 331 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 CORO7P57737 925 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PRR5P85299 388 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 HSF1Q00613 529 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PDE7AQ13946 482 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 EFR3AQ14156 821 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SMU1Q2TAY7 513 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 PGS1Q32NB8 556 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SPDYE7PQ495Y7 208 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 VPS26BQ4G0F5 336 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SPPL2CQ8IUH8 684 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 EID3Q8N140 333 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SPPL2AQ8TCT8 520 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 TMBIM1Q969X1 311 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ELP4Q96EB1 424 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 VSTM2LQ96N03 204 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 RILPQ96NA2 401 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 COL21A1Q96P44 957 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 C20orf27Q9GZN8 174 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 Q9N2J8 555 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 EQTNQ9NQ60 294 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ACSS1Q9NUB1 689 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ATP6V1HQ9UI12 483 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 ERRFI1Q9UJM3 462 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-215ENST00000528396 HAO1Q9UJM8 370 aa12.3□□□□□ -0.44
CAPN1-215ENST00000528396 MRTO4Q9UKD2 239 aaKnown RBP12.3□□□□□ -0.44
CAPN1-215ENST00000528396 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
CAPN1-215ENST00000528396 A0A1B0GTH9 108 aa12.29□□□□□ -0.44
CAPN1-215ENST00000528396 A0A1W2PRB8 838 aa12.29□□□□□ -0.44
CAPN1-215ENST00000528396 CLEC18AA5D8T8 446 aa12.29□□□□□ -0.44
CAPN1-215ENST00000528396 ANKRD33BA6NCL7 494 aa12.29□□□□□ -0.44
CAPN1-215ENST00000528396 HMGB1P1B2RPK0 211 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-215ENST00000528396 SLCO1B7G3V0H7 640 aa12.29□□□□□ -0.44
CAPN1-215ENST00000528396 UPK1AO00322 258 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms