RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SERPINB4P48594 390 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 NCBP2P52298 156 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 ADORA2A-AS1P86434 159 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 PRSS53Q2L4Q9 553 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 SH2D4BQ5SQS7 431 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 SLC30A6Q6NXT4 461 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 LRIG3Q6UXM1 1119 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZCCHC23Q6ZST2 131 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 CD163Q86VB7 1156 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR7G2Q8NG99 324 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 HGDQ93099 445 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 MTERF3Q96E29 417 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 OMA1Q96E52 524 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMEM41AQ96HV5 264 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 EGLN2Q96KS0 407 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZNF597Q96LX8 424 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 PPP3R2Q96LZ3 170 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 VSTM2LQ96N03 204 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZIM3Q96PE6 472 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 GLIPR2Q9H4G4 154 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 REEP4Q9H6H4 257 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 LDAHQ9H6V9 325 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZNF703Q9H7S9 590 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 C19orf53Q9UNZ5 99 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 HRH3Q9Y5N1 445 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 PTGDR2Q9Y5Y4 395 aa11.11□□□□□ -0.63
TRAPPC4-209ENST00000528230 TRGV5A0A0B4J1U4 118 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR6C70A6NIJ9 312 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 LRRC3CA6NJW4 275 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMEM114B3SHH9 223 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMEM233B4DJY2 109 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 PIP5K1BO14986 540 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ERN1O75460 977 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ERLIN1O75477 346 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZWINTO95229 277 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 JUNP05412 331 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 RFPL3SP0C7P2 107 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 DHRS4L1P0CG22 281 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 SDC1P18827 310 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 MAPK1P28482 360 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ARRB2P32121 409 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 MAN2A2P49641 1150 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 RPL38P63173 70 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 GXYLT1Q4G148 440 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 XKR7Q5GH72 579 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 HIST2H2BCQ6DN03 193 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 DDIASQ8IXT1 998 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 PRR22Q8IZ63 422 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 PPP1R14CQ8TAE6 165 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 SARAFQ96BY9 339 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMCO6Q96DC7 493 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ELP4Q96EB1 424 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 SLC35A4Q96G79 324 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 JSRP1Q96MG2 331 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 RILPQ96NA2 401 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 AMDHD1Q96NU7 426 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ANKRA2Q9H9E1 313 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 FOLH1BQ9HBA9 442 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZDHHC2Q9UIJ5 367 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 PCDHGB3Q9Y5G1 929 aa11.1□□□□□ -0.63
TRAPPC4-209ENST00000528230 ARHGAP21Q5T5U3 1957 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 NPIPA2E9PIF3 369 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 NPIPA3F8WFD2 350 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 UPK1AO00322 258 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 TSPAN2O60636 221 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 UGT2B11O75310 529 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 REM1O75628 298 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 PSMG1O95456 288 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 SERPINE1P05121 402 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 CELA3AP09093 270 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 BCKDHAP12694 445 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 GRK2P25098 689 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 COL8A1P27658 744 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 RPL3P39023 403 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 DCTP40126 519 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 FRKP42685 505 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 MASP1P48740 699 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 MRPS22P82650 360 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 PDE7AQ13946 482 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 EFR3AQ14156 821 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 NNATQ16517 81 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZNF630Q2M218 657 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 GALNTL6Q49A17 601 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 FNDC7Q5VTL7 733 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 BICRALQ6AI39 1079 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 TIGD3Q6B0B8 471 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 R3HCC1LQ7Z5L2 792 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 KIRREL3Q8IZU9 778 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms