RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SLC30A8Q8IWU4 369 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 SUN3Q8TAQ9 357 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ADAMTS18Q8TE60 1221 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 FBXL20Q96IG2 436 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 SOX17Q9H6I2 414 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 VNN3Q9NY84 501 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 USE1Q9NZ43 259 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ENTPD4Q9Y227 616 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ANGPT4Q9Y264 503 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 CELSR3Q9NYQ7 3312 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 H0YAE9 185 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 GPR75O95800 540 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 PRKACGP22612 351 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 PTGER1P34995 402 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 ADARB1P78563 741 aaKnown RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 TP53BP2Q13625 1128 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 CEBPEQ15744 281 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 RSPO4Q2I0M5 234 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 ZNF595Q8IYB9 648 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 ANKRD9Q96BM1 317 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 TAMM41Q96BW9 452 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 C7orf34Q96L11 122 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 OR1F2PQ96R84 312 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 GIMAP4Q9NUV9 329 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 IFT80Q9P2H3 777 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 TEX51A0A1B0GUA7 166 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 MYOCOSA0A1B0GUC4 107 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 CLDN4O14493 209 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 CLIC3O95833 236 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 IFNA14P01570 189 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 SMIM18P0DKX4 95 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 CSNK2A2P19784 350 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 ARHGDIAP52565 204 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 IQCCQ4KMZ1 466 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 LCN10Q6JVE6 187 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 REEP3Q6NUK4 255 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 SHQ1Q6PI26 577 aaKnown RBP17.55■□□□□ 0.4
SMPD1-203ENST00000527275 LZICQ8WZA0 190 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 RDH12Q96NR8 316 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 PRTFDC1Q9NRG1 225 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 LANCL2Q9NS86 450 aa17.55■□□□□ 0.4
SMPD1-203ENST00000527275 C9orf172C9J069 976 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 CTNSO60931 367 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 H6PDO95479 791 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 LINGO3P0C6S8 592 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 MAOAP21397 527 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 MPIP34949 423 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 PCBP3P57721 371 aaKnown RBP17.54■□□□□ 0.4
SMPD1-203ENST00000527275 FOXL2P58012 376 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 MINDY4Q4G0A6 757 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 ANKRD34AQ69YU3 496 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 LAPTM4BQ86VI4 370 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 PRSS58Q8IYP2 241 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 SPPL2AQ8TCT8 520 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 ADAMTS14Q8WXS8 1223 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 ZPBPQ9BS86 351 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 DDA1Q9BW61 102 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 A4GALTQ9NPC4 353 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 MKKSQ9NPJ1 570 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-203ENST00000527275 DLL3Q9NYJ7 618 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 PADI2Q9Y2J8 665 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 CCDC88CQ9P219 2028 aa17.54■□□□□ 0.4
SMPD1-203ENST00000527275 TGFBR3LH3BV60 316 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 STK17BO94768 372 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 KLK3P07288 261 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 CPMP14384 443 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 DNAJA1P31689 397 aaKnown RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 FAM199XQ6PEV8 388 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 USP51Q70EK9 711 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 SZRD1Q7Z422 152 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 PATL1Q86TB9 770 aaKnown RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 SAMD14Q8IZD0 417 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 CACTIN-AS1Q8N1I8 211 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 SLC38A5Q8WUX1 472 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 RAB8BQ92930 207 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 LRFN5Q96NI6 719 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 SEMA3GQ9NS98 782 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 ZCCHC3Q9NUD5 404 aaKnown RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 MYRFQ9Y2G1 1151 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 CLDN16Q9Y5I7 305 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 PIEZO1Q92508 2521 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 DCDC2BA2VCK2 349 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 BLACEA4D250 179 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 C5orf58C9J3I9 102 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 H3BNH8 94 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 HMGN4O00479 90 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 HS6ST1O60243 411 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 ONECUT2O95948 504 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 TFPTP0C1Z6 253 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 HSD17B7P56937 341 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 IFI44LQ53G44 452 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 MFSD4BQ5TF39 518 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 TMEM164Q5U3C3 297 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 RNF220Q5VTB9 566 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 MED25Q71SY5 747 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 LRRC25Q8N386 305 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-203ENST00000527275 GALNT6Q8NCL4 622 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 STT3BQ8TCJ2 826 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 RMND5BQ96G75 393 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms