RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 AP1ARQ63HQ0 302 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 SLC5A8Q8N695 610 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 OR4A15Q8NGL6 344 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 FAM110BQ8TC76 370 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 MIPOL1Q8TD10 442 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 LCORQ96JN0 433 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ZBTB18Q99592 522 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 RNF32Q9H0A6 362 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 IKZF5Q9H5V7 419 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ZNF71Q9NQZ8 489 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 FBXO34Q9NWN3 711 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ANKRD10Q9NXR5 420 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 VAPAQ9P0L0 249 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ARL2BPQ9Y2Y0 163 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 YARS2Q9Y2Z4 477 aaKnown RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 PCDHB14Q9Y5E9 798 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 CNTRLQ7Z7A1 2325 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 LOC100653049A0A140TA62 436 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 MKRN2OSH3BPM6 223 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 FXYD1O00168 92 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 CFLARO15519 480 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 TSPAN2O60636 221 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 CCDC22O60826 627 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 ERN1O75460 977 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 KRT34O76011 436 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 SNRPB2P08579 225 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 GPC1P35052 558 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 HLCSP50747 726 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 PRKAG1P54619 331 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 CASP9P55211 416 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 KCNK10P57789 538 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 RPS26P62854 115 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NNATQ16517 81 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 MAPKAPK3Q16644 382 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 PLEKHN1Q494U1 663 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 COX20Q5RI15 118 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 FAM91A1Q658Y4 838 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 SPINK14Q6IE38 97 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 Q6ZS92 163 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 SLC29A4Q7RTT9 530 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 MDGA2Q7Z553 956 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 ZAR1Q86SH2 424 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 FITM2Q8N6M3 262 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 Q8NA96 180 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 OR5L2Q8NGL0 311 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 RNF138Q8WVD3 245 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 HGDQ93099 445 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NEURL3Q96EH8 262 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 OTUB1Q96FW1 271 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 AURKBQ96GD4 344 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 PANX1Q96RD7 426 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 RSPO3Q9BXY4 272 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 HES7Q9BYE0 225 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NSRP1Q9H0G5 558 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 C3orf14Q9HBI5 128 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NEUROD4Q9HD90 331 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 ZCCHC3Q9NUD5 404 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 DDX18Q9NVP1 670 aaKnown RBP9.93□□□□□ -0.82
NEDD8-205ENST00000527046 GIN1Q9NXP7 522 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 COPS7AQ9UBW8 275 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 PRODH2Q9UF12 536 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NDUFAF1Q9Y375 327 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 PCDHGB7Q9Y5F8 929 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 NPFFR2Q9Y5X5 522 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 ATMQ13315 3056 aa9.93□□□□□ -0.82
NEDD8-205ENST00000527046 A0A096LPI6 279 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 DYTNA2CJ06 578 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 FRG2CA6NGY1 282 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 B4DXG7 233 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 RFXANKO14593 260 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SLC22A2O15244 555 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ATXN7O15265 892 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 DYRK3O43781 588 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 WISP2O76076 250 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ABCD3P28288 659 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 GABRA3P34903 492 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 PTGDSP41222 190 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 TNFSF10P50591 281 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 GZMMP51124 257 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 DCAF7P61962 342 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 AP2B1P63010 937 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 FUT5Q11128 374 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SELPLGQ14242 412 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 LASP1Q14847 261 aaKnown RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 NTRK2Q16620 822 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 NADK2Q4G0N4 442 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 RUNDC3AQ59EK9 446 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ABHD17BQ5VST6 288 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 HEPHL1Q6MZM0 1159 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 CDC73Q6P1J9 531 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 C8orf82Q6P1X6 216 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ZCCHC12Q6PEW1 402 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ZNF621Q6ZSS3 439 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms