RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RBM38Q9H0Z9 239 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 TFB2MQ9H5Q4 396 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 ALG9Q9H6U8 611 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MVB12BQ9H7P6 319 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PARVBQ9HBI1 364 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MED4Q9NPJ6 270 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 IMP3Q9NV31 184 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 UTP6Q9NYH9 597 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 TAAR2Q9P1P5 351 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 LNPEPQ9UIQ6 1025 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 DHDHQ9UQ10 334 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 OSGIN2Q9Y236 505 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ASF1AQ9Y294 204 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 WDR37Q9Y2I8 494 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 TDRKHQ9Y2W6 561 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 PLLPQ9Y342 182 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 RAP2CQ9Y3L5 183 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ANKRD12Q6UB98 2062 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 A0A0G2JNG1 304 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OR52A4PA6NMU1 304 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SYCE1LA8MT33 242 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 STX16-NPEPL1H3BU86 382 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CDX4O14627 284 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 STX16O14662 325 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TM9SF1O15321 606 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ZW10O43264 779 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 KIF1CO43896 1103 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 TYROBPO43914 113 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SMIM24O75264 130 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ZWINTO95229 277 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 LDOC1O95751 146 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 GUCA1CO95843 209 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TSPAN12O95859 305 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 DDAH2O95865 285 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ALPLP05186 524 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ANXA5P08758 320 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TPBGLP0DKB5 382 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CPA3P15088 417 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 EPHA8P29322 1005 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 RPA3P35244 121 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 HSD17B2P37059 387 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SLC18A1P54219 525 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 KIR2DS5Q14953 304 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SF3A2Q15428 464 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 OR4D1Q15615 310 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ODF3L2Q3SX64 289 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TTMPQ5BVD1 217 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 N4BP2L1Q5TBK1 243 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 TCEAL6Q6IPX3 200 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SLC22A25Q6T423 547 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SBSNQ6UWP8 590 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CDHR3Q6ZTQ4 885 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 FRA10AC1Q70Z53 315 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 ADAMTSL2Q86TH1 951 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SLC9B2Q86UD5 537 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 EGFL6Q8IUX8 553 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TBC1D21Q8IYX1 336 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CENPLQ8N0S6 344 aaPredicted RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 NAGSQ8N159 534 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 MINDY1Q8N5J2 469 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 EID2Q8N6I1 236 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SCAIQ8N9R8 606 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 C7orf57Q8NEG2 295 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OR4E2Q8NGC2 313 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OR5AR1Q8NGP9 310 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OR9A1PQ8NGU1 263 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OR5K2Q8NHB8 316 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CEP70Q8NHQ1 597 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 RHEBL1Q8TAI7 183 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TCP10LQ8TDR4 215 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SETD7Q8WTS6 366 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 ATL1Q8WXF7 558 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TCEAL3Q969E4 200 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 PTERQ96BW5 349 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CCDC126Q96EE4 140 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 APOPT1Q96IL0 206 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 RMDN2Q96LZ7 410 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CAMK1GQ96NX5 476 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TEFMQ96QE5 360 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 EGFL8Q99944 293 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 PAIP2Q9BPZ3 127 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 MRPL57Q9BQC6 102 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 SELENOSQ9BQE4 189 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 STN1Q9H668 368 aaKnown RBP4.23□□□□□ -1.73
USP48-211ENST00000526044 RDH14Q9HBH5 336 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 SLC40A1Q9NP59 571 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TMEM9BQ9NQ34 198 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 KRT84Q9NSB2 600 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 NKIRAS1Q9NYS0 192 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 NLGN3Q9NZ94 848 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 CD274Q9NZQ7 290 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 UPB1Q9UBR1 384 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 IKZF3Q9UKT9 509 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 TMCO1Q9UM00 188 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 PDE10AQ9Y233 779 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 OARD1Q9Y530 152 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 GON4LQ3T8J9 2241 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms