RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TMEM81Q6P7N7 255 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 CLEC2AQ6UVW9 174 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 FAM83HQ6ZRV2 1179 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 RPS19BP1Q86WX3 136 aaKnown RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 TTC29Q8NA56 475 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 C1orf131Q8NDD1 294 aaKnown RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 KLHL29Q96CT2 875 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 MSI2Q96DH6 328 aaKnown RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 TIGD1Q96MW7 591 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 FRG2BQ96QU4 278 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 NUDCD1Q96RS6 583 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 FAM118BQ9BPY3 351 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 ZSCAN5AQ9BUG6 496 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 TFB2MQ9H5Q4 396 aaKnown RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 LRRC19Q9H756 370 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 KLHL28Q9NXS3 571 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 PKD2L2Q9NZM6 624 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 KLHL13Q9P2N7 655 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 UTS2RQ9UKP6 389 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 LIPGQ9Y5X9 500 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 HEBP2Q9Y5Z4 205 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 SCINQ9Y6U3 715 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.41
NEDD8-203ENST00000524927 PABPN1LA6NDY0 278 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 FAM166BA8MTA8 275 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 RHODO00212 210 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 NDC80O14777 642 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 SSX4O60224 188 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 POP7O75817 140 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 CLDN7O95471 211 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 CYC1P08574 325 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 UGT2B7P16662 529 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 FBLP22087 321 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 MPGP29372 298 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 FMO4P31512 558 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ARL3P36405 182 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 CDKN1AP38936 164 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 GABRB2P47870 512 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 CLNS1AP54105 237 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ARF3P61204 181 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ARF1P84077 181 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 PLGLB1Q02325 96 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 NRF1Q16656 503 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ACSF3Q4G176 576 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 WDR59Q6PJI9 974 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 FAM57BQ71RH2 274 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 PRSS45Q7RTY3 260 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 CPEB2Q7Z5Q1 589 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 TRIM73Q86UV7 250 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 AMIGO1Q86WK6 493 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 WDTC1Q8N5D0 677 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 TRAM1L1Q8N609 369 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 METTL21AQ8WXB1 218 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF606Q8WXB4 792 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 PROX1Q92786 737 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 KLHL15Q96M94 604 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF285Q96NJ3 590 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 PIMREGQ9BSJ6 248 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 MED18Q9BUE0 208 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 NUP85Q9BW27 656 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 SPATA16Q9BXB7 569 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 WWP1Q9H0M0 922 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 GRHL1Q9NZI5 618 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 C19orf25Q9UFG5 118 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 TTC7AQ9ULT0 858 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 TRAF3IP3Q9Y228 551 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 LIPT1Q9Y234 373 aa6.21□□□□□ -1.42
NEDD8-203ENST00000524927 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.21□□□□□ -1.42
NEDD8-203ENST00000524927 KIAA1549Q9HCM3 1950 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 A0A0J9YY10 115 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 ARHGAP42A6NI28 874 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SCAMP2O15127 329 aaKnown RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 CALUO43852 315 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 MTX2O75431 263 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 GLSO94925 669 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 TGFAP01135 160 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 TUBB4AP04350 444 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 CLEC3BP05452 202 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 LCKP06239 509 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SLC35G4P0C7Q5 338 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 EIF3BP55884 814 aaKnown RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 PROK1P58294 105 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 RPS3AP61247 264 aaKnown RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 LRMPQ12912 555 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 NFE2L1Q14494 772 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SF3B4Q15427 424 aaKnown RBP eCLIP6.2□□□□□ -1.423e-15■■■■□ 24.1
NEDD8-203ENST00000524927 CAMK4Q16566 473 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 ALG10Q5BKT4 473 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 ALG10BQ5I7T1 473 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 AAGABQ6PD74 315 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SARM1Q6SZW1 724 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 MOB3CQ70IA8 216 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SLC26A11Q86WA9 606 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 C11orf65Q8NCR3 313 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 CAPZA3Q96KX2 299 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 SMIM14Q96QK8 99 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 OR2A14Q96R47 310 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms