RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 LAMP1P11279 417 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 EPHA3P29320 983 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 KRT20P35900 424 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 DIO3P55073 304 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 MRPS22P82650 360 aaKnown RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 PRR5P85299 388 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 PMP22Q01453 160 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 SRSF11Q05519 484 aaKnown RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 PLCXD2Q0VAA5 305 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 ZNF155Q12901 538 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 ZNHIT3Q15649 155 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 KRTCAP3Q53RY4 240 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 CT45A2Q5DJT8 189 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 ZCCHC12Q6PEW1 402 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 TMEM64Q6YI46 380 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 NUP54Q7Z3B4 507 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 CPSF7Q8N684 471 aaKnown RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 SIMC1Q8NDZ2 872 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 FAM13CQ8NE31 585 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OR2M7Q8NG81 312 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OR10G3Q8NGC4 313 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OR8J2Q8NGG1 315 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 PSMA8Q8TAA3 256 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 STON2Q8WXE9 905 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 HOXB13Q92826 284 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 MOAP1Q96BY2 351 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OMA1Q96E52 524 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 DUSP26Q9BV47 211 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 AIG1Q9NVV5 245 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 CHCHD2Q9Y6H1 151 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-225ENST00000523950 USH1CQ9Y6N9 552 aa11.56□□□□□ -0.56
VEGFA-225ENST00000523950 OR6C70A6NIJ9 312 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 RNASET2O00584 256 aaKnown RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ZNF195O14628 629 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ANKRD28O15084 1053 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 EMC8O43402 210 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SOX30O94993 753 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SNX4O95219 450 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ALDOCP09972 364 aaKnown RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 IDO1P14902 403 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 GNLYP22749 145 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 CDK9P50750 372 aaKnown RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 IRX1P78414 480 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 RBPJQ06330 500 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 EFR3AQ14156 821 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ZSCAN26Q16670 478 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 GSTA3Q16772 222 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 HYAL4Q2M3T9 481 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.561e-13■□□□□ 11.3
VEGFA-225ENST00000523950 VPS26BQ4G0F5 336 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 CYP27C1Q4G0S4 372 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 FAM47EQ6ZV65 393 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ACAD11Q709F0 780 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 KRTCAP2Q8N6L1 136 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 GLB1L3Q8NCI6 653 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 VPS37AQ8NEZ2 397 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SPPL2AQ8TCT8 520 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 GPR137Q96N19 417 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 MS4A4EQ96PG1 132 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 CLMPQ9H6B4 373 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 WDR55Q9H6Y2 383 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 ANKRA2Q9H9E1 313 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 IL1RL2Q9HB29 575 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 Q9N2J8 555 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SLCO1B3Q9NPD5 702 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 DEPPQ9NTK1 212 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 SEC14L3Q9UDX4 400 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 MRTO4Q9UKD2 239 aaKnown RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 BOKQ9UMX3 212 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-225ENST00000523950 EML6Q6ZMW3 1958 aa11.55□□□□□ -0.56
VEGFA-225ENST00000523950 E9PBE3 544 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 TFECO14948 347 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 ABCB1P08183 1280 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 KRT16P08779 473 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 MST1P26927 711 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 KIR3DL1P43629 444 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PRIM2P49643 509 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PNLIPRP2P54317 469 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PSMD4P55036 377 aaKnown RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 FBXW4P57775 412 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 GPR85P60893 370 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PSG6Q00889 435 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 LRRC74AQ0VAA2 488 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SNTA1Q13424 505 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 NNATQ16517 81 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SLC9B1Q4ZJI4 515 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PDCD4Q53EL6 469 aaKnown RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 ANXA8L1Q5VT79 327 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 NXNQ6DKJ4 435 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 BHLHB9Q6PI77 547 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 EPGNQ6UW88 154 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 GFRALQ6UXV0 394 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 NPSR1Q6W5P4 371 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 MAVSQ7Z434 540 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms