RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 C21orf58P58505 322 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SLAMF1Q13291 335 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 DOC2AQ14183 400 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 TAB1Q15750 504 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 NNATQ16517 81 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 HSP90AA5PQ58FG0 334 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 PEX26Q7Z412 305 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 GPR180Q86V85 440 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 C2CD4AQ8NCU7 369 aaPredicted RBP12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 STEAP2Q8NFT2 490 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 OMA1Q96E52 524 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 DTNBP1Q96EV8 351 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 EHD1Q9H4M9 534 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 DNAJC11Q9NVH1 559 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 CLEC4AQ9UMR7 237 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SNX8Q9Y5X2 465 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 A0A0A6YYJ9 748 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 A0A1W2PS29 197 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 MAGEB16A2A368 324 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 SS18L1O75177 396 aaPredicted RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 SH3BGRLO75368 114 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CSF3P09919 207 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CCDC166P0CW27 439 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 FCGR2AP12318 317 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CD22P20273 847 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 TLX1P31314 330 aaPredicted RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 HNMTP50135 292 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CDH11P55287 796 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CLDN20P56880 219 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 CDKL1Q00532 357 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 RAB35Q15286 201 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 SPA17Q15506 151 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 MIDNQ504T8 468 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 TMEM35AQ53FP2 167 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 OR5M10Q6IEU7 315 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GALNT12Q8IXK2 581 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 PIWIL2Q8TC59 973 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GCDHQ92947 438 aaPredicted RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GMPPAQ96IJ6 420 aaPredicted RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 EGFL8Q99944 293 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 FAM167BQ9BTA0 163 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 ZNF337Q9Y3M9 751 aa12.36□□□□□ -0.43
NKX3-1-202ENST00000523261 GLOD5A6NK44 160 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 GOLGA6L19H0YKK7 550 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 SAP18O00422 153 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 MBD3O95983 291 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 APEHP13798 732 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 SRP14P37108 136 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 SLC6A8P48029 635 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 CTBP2P56545 445 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 PLCXD2Q0VAA5 305 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 KCTD19Q17RG1 926 aaPredicted RBP12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 FIGNL1Q6PIW4 674 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 METTL25Q8N6Q8 603 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 KAT2AQ92830 837 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 WDR34Q96EX3 536 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 PTCD3Q96EY7 689 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 CBLN4Q9NTU7 201 aa12.35□□□□□ -0.43
NKX3-1-202ENST00000523261 NPEPPSL1A6NEC2 478 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 TMPRSS2O15393 492 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 GCM2O75603 506 aaPredicted RBP12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 TGFB1P01137 390 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 CCDC175P0C221 793 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 S1PR1P21453 382 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 BUD31P41223 144 aaPredicted RBP12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 TERF1P54274 439 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 IRF9Q00978 393 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 OR4C11Q6IEV9 310 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 GBP7Q8N8V2 638 aaPredicted RBP12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 EFCAB11Q9BUY7 163 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 HDHD5Q9BXW7 423 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 STMN4Q9H169 189 aaPredicted RBP12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
NKX3-1-202ENST00000523261 IGHV4-61A0A0C4DH41 118 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms