RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 PACSIN2Q9UNF0 486 aaPredicted RBP6.62□□□□□ -1.35
SPIDR-215ENST00000521798 HEY1Q9Y5J3 304 aa6.62□□□□□ -1.35
SPIDR-215ENST00000521798 ASCC3Q8N3C0 2202 aaKnown RBP6.62□□□□□ -1.35
SPIDR-215ENST00000521798 WDFY3Q8IZQ1 3526 aa6.62□□□□□ -1.35
SPIDR-215ENST00000521798 A0A1B0GVT2 93 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 KCNK1O00180 336 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 DVL1O14640 695 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CST8O60676 142 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CNOT3O75175 753 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 C9P02748 559 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 PRKCGP05129 697 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 HLA-DQB2P05538 268 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CCNB1P14635 433 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ETS1P14921 441 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 HSPA9P38646 679 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 IER3P46695 156 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CSNK1EP49674 416 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RWDD2BP57060 319 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 GMFBP60983 142 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 AP1S1P61966 158 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ZNF91Q05481 1191 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 BCL2L1Q07817 233 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ZBTB17Q13105 803 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 UGP2Q16851 508 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 HSP90AA5PQ58FG0 334 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 FAM182AQ5T1J6 154 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 STPG1Q5TH74 334 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 DGLUCYQ7Z3D6 616 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ADGRG3Q86Y34 549 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CHERPQ8IWX8 916 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 AQP12AQ8IXF9 295 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RCOR2Q8IZ40 523 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 BBS5Q8N3I7 341 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RNF10Q8N5U6 811 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CCNYQ8ND76 341 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 SEMA6DQ8NFY4 1073 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 VANGL1Q8TAA9 524 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 HCAR2Q8TDS4 363 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 PPP4R1Q8TF05 950 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 SLC44A1Q8WWI5 657 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 KLK6Q92876 244 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RAB7BQ96AH8 199 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 TMEM186Q96B77 213 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RBM18Q96H35 190 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RBM41Q96IZ5 413 aaKnown RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ZNF641Q96N77 438 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 NAP1L3Q99457 506 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ATG101Q9BSB4 218 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 TSGA10Q9BZW7 698 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 ATP13A3Q9H7F0 1226 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 NT5MQ9NPB1 228 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 RBM22Q9NW64 420 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 PACSIN3Q9UKS6 424 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 GUCA1BQ9UMX6 200 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 CA5BQ9Y2D0 317 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPIDR-215ENST00000521798 LOXL2Q9Y4K0 774 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 DOCK9Q9BZ29 2069 aa6.61□□□□□ -1.35
SPIDR-215ENST00000521798 TRPM6Q9BX84 2022 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 A0A1W2PPK0 400 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 IGLON5A6NGN9 336 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 C4orf47A7E2U8 309 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 MS4A18H0YCH9 400 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 RAD51BO15315 384 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 SLC31A1O15431 190 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 ITM2AO43736 263 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 KRT86O43790 486 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 RAD51DO75771 328 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 IFNB1P01574 187 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 JCHAINP01591 159 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 CD38P28907 300 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 NUDT1P36639 197 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 RPL3P39023 403 aaKnown RBP6.6□□□□□ -1.35
SPIDR-215ENST00000521798 MMP12P39900 470 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 ACAA2P42765 397 aaKnown RBP6.6□□□□□ -1.35
SPIDR-215ENST00000521798 NPBWR1P48145 328 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 NR2C2P49116 596 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 ZP1P60852 638 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 RPS21P63220 83 aaKnown RBP6.6□□□□□ -1.35
SPIDR-215ENST00000521798 TRAF2Q12933 501 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 TFDP2Q14188 446 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 KIF19Q2TAC6 998 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 TMEM52BQ4KMG9 183 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 LACTB2Q53H82 288 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-215ENST00000521798 KCTD11Q693B1 232 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 KIAA1161Q6NSJ0 714 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 Q75L30 129 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 PEX26Q7Z412 305 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 CCDC50Q8IVM0 306 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 TBC1D21Q8IYX1 336 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 SYCE1Q8N0S2 351 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 OR5M8Q8NGP6 311 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 CCDC110Q8TBZ0 833 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 SSMEM1Q8WWF3 244 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 HAUS1Q96CS2 278 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 SERAC1Q96JX3 654 aa6.6□□□□□ -1.35
SPIDR-215ENST00000521798 IL12RB2Q99665 862 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms