RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CCL27Q9Y4X3 112 aa4.55□□□□□ -1.68
CTNNA1-212ENST00000518919 NEUROG3Q9Y4Z2 214 aa4.55□□□□□ -1.68
CTNNA1-212ENST00000518919 A3GALT2U3KPV4 340 aa4.55□□□□□ -1.68
CTNNA1-212ENST00000518919 PLXNA2O75051 1894 aa4.55□□□□□ -1.68
CTNNA1-212ENST00000518919 KIF26AQ9ULI4 1882 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 MYOFQ9NZM1 2061 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 A0A1W2PQ67 120 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TRBC2A0A5B9 178 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 KRT87PA6NCN2 255 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PRORSD1PA6NEY8 169 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 EPOPA6NHQ4 379 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 A6NL46 340 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 EIF4E1BA6NMX2 242 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 VGLL3A8MV65 326 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 NME4O00746 187 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 LIN7AO14910 233 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ANKRD28O15084 1053 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 LSM1O15116 133 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 OGG1O15527 345 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 UGDHO60701 494 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 MTX2O75431 263 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 GPC4O75487 556 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CRCPO75575 148 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 GUCA1CO95843 209 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SOD1P00441 154 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CAPN1P07384 714 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CA3P07451 260 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 MPC1LP0DKB6 136 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CBSLP0DN79 551 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 IDO1P14902 403 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF30P17039 623 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 VCLP18206 1134 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 POLR2EP19388 210 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ME2P23368 584 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 FCARP24071 287 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CBSP35520 551 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 NSG1P42857 185 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 GDF5P43026 501 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SLC6A12P48065 614 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF41P51814 821 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 AQP4P55087 323 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ERVK-8P63133 956 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 IRX1P78414 480 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SORDQ00796 357 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PLIN5Q00G26 463 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 STX5Q13190 355 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ITGADQ13349 1161 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 GTF2H2Q13888 395 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 RCAN2Q14206 197 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CAPRIN1Q14444 709 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 DUSP6Q16828 381 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZXDCQ2QGD7 858 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TTLL9Q3SXZ7 439 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 POM121L1PQ3SYA9 428 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SPATS1Q496A3 300 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 VPS26BQ4G0F5 336 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CDONQ4KMG0 1287 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF658BQ4V348 819 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ESCO2Q56NI9 601 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 COQ5Q5HYK3 327 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 FAM78AQ5JUQ0 283 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 C6orf136Q5SQH8 315 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 C9orf50Q5SZB4 431 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 LPCAT4Q643R3 524 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PMS2CLQ68D20 193 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 HIST2H2BCQ6DN03 193 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 HIST2H2BDQ6DRA6 164 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SULT1C3Q6IMI6 304 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 IRGCQ6NXR0 463 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 GTF2H2CQ6P1K8 395 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 BRAT1Q6PJG6 821 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 RNF165Q6ZSG1 346 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 Q6ZSR9 355 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 DET1Q7L5Y6 550 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SPATA19Q7Z5L4 167 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TECPR1Q7Z6L1 1165 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SLC35F3Q8IY50 421 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TRAM1L1Q8N609 369 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF557Q8N988 423 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 DDHD1Q8NEL9 900 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 OR4F6Q8NGB9 312 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 FAM110BQ8TC76 370 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SMG7Q92540 1137 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ROPN1LQ96C74 230 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 TMCO6Q96DC7 493 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ASB9Q96DX5 294 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 RRNAD1Q96FB5 475 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 HBEGFQ99075 208 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SERPINI1Q99574 410 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF184Q99676 751 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 EGFL8Q99944 293 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 C1orf50Q9BV19 199 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 SLC2A11Q9BYW1 496 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 LHPPQ9H008 270 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ACTL8Q9H568 366 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 AAMDCQ9H7C9 122 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 RDH14Q9HBH5 336 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms