RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CT45A2Q5DJT8 189 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 NXNQ6DKJ4 435 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 FBXW8Q8N3Y1 598 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 OR2M7Q8NG81 312 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 OR5M3Q8NGP4 307 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 OR5P2Q8WZ92 322 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 TESCQ96BS2 214 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 OMA1Q96E52 524 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 FAM173AQ9BQD7 235 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 ANKUB1A6NFN9 424 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 DIAPH2O60879 1101 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 PPM1BO75688 479 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 ZNF24P17028 368 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 CLNS1AP54105 237 aaKnown RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 PSG6Q00889 435 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 PLCXD2Q0VAA5 305 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 MRPL49Q13405 166 aaKnown RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 PGS1Q32NB8 556 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 LSM12Q3MHD2 195 aaKnown RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 EPGNQ6UW88 154 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 NPSR1Q6W5P4 371 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 GK5Q6ZS86 529 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 FAM47EQ6ZV65 393 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 SLC34A3Q8N130 599 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 OR8J2Q8NGG1 315 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 CEP70Q8NHQ1 597 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 PSMA8Q8TAA3 256 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 SECISBP2Q96T21 854 aaKnown RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 C3orf14Q9HBI5 128 aa20.23■□□□□ 0.83
VEGFA-217ENST00000518538 SIRT3Q9NTG7 399 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 CNOT11Q9UKZ1 510 aaKnown RBP20.23■□□□□ 0.83
VEGFA-217ENST00000518538 A0A0G2JMM0 328 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 A0A1W2PPB8 328 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 A0A1W2PRS3 328 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 KIR3DP1A8MWS1 328 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 G3V3Y1 287 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 ABCB1P08183 1280 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 RPP38P78345 283 aaKnown RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 KCNC4Q03721 635 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 SRSF11Q05519 484 aaKnown RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 ELOAQ14241 798 aaKnown RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 DPY19L1Q2PZI1 675 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 RNFT1Q5M7Z0 435 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 SIAH3Q8IW03 269 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 SLC44A2Q8IWA5 706 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 SPPL2AQ8TCT8 520 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 MS4A4EQ96PG1 132 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 OR52B2Q96RD2 323 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 LMF2Q9BU23 707 aaKnown RBP20.22■□□□□ 0.83
VEGFA-217ENST00000518538 NEUROD4Q9HD90 331 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 GPR45Q9Y5Y3 372 aa20.22■□□□□ 0.83
VEGFA-217ENST00000518538 PINLYPA6NC86 204 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 ANKRD33BA6NCL7 494 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 TTC36A6NLP5 189 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 EMC8O43402 210 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 C6orf47O95873 294 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 IDO1P14902 403 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 PIGAP37287 484 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 KIR3DL1P43629 444 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 PRR5P85299 388 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 ZNHIT3Q15649 155 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-217ENST00000518538 TBCELQ5QJ74 424 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 PRAMEF20Q5VT98 475 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 OR4F3Q6IEY1 312 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 NUP54Q7Z3B4 507 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 SZRD1Q7Z422 152 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 NUP43Q8NFH3 380 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 DIO2Q92813 273 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 TMBIM1Q969X1 311 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 GPR137Q96N19 417 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 CLMPQ9H6B4 373 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 OR10H1Q9Y4A9 318 aa20.21■□□□□ 0.83
VEGFA-217ENST00000518538 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 E9PBE3 544 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 RNASET2O00584 256 aaKnown RBP20.2■□□□□ 0.82
VEGFA-217ENST00000518538 RFC3P40938 356 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 DNASE1L1P49184 302 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 PRKAG1P54619 331 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 WNT3P56703 355 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 UFM1P61960 85 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 PLGLB1Q02325 96 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 GSTA3Q16772 222 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 CYP27C1Q4G0S4 372 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 KRTCAP3Q53RY4 240 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 ACAD11Q709F0 780 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 HOXB13Q92826 284 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-217ENST00000518538 HGDQ93099 445 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 FAM120BQ96EK7 910 aaKnown RBP20.2■□□□□ 0.82
VEGFA-217ENST00000518538 GIMAP5Q96F15 307 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 SLC35A4Q96G79 324 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 TEX37Q96LM6 180 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 TSPAN10Q9H1Z9 355 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-217ENST00000518538 PROK2Q9HC23 129 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 Q9N2J8 555 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 EQTNQ9NQ60 294 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 ZCCHC3Q9NUD5 404 aaKnown RBP20.2■□□□□ 0.82
VEGFA-217ENST00000518538 SEC14L3Q9UDX4 400 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 SNX8Q9Y5X2 465 aa20.2■□□□□ 0.82
VEGFA-217ENST00000518538 OR6C70A6NIJ9 312 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms