RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ZCCHC18P0CG32 403 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NR2F1P10589 423 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NAGAP17050 411 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CAPN3P20807 821 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FRKP42685 505 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MAGEA8P43361 318 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MASP1P48740 699 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUDT2P50583 147 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RASSF2P50749 326 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SOX8P57073 446 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MLF1P58340 268 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DUSP2Q05923 314 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CAPRIN1Q14444 709 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EBPQ15125 230 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TLR1Q15399 786 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NNATQ16517 81 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CYP51A1Q16850 503 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MPEG1Q2M385 716 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TRMT5Q32P41 509 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GPAT3Q53EU6 434 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PIGGQ5H8A4 983 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 COQ5Q5HYK3 327 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 B3GNTL1Q67FW5 361 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CDC73Q6P1J9 531 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C16orf89Q6UX73 402 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DGAT2L6Q6ZPD8 337 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RTL4Q6ZR62 310 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ASB18Q6ZVZ8 466 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KRT73Q86Y46 540 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FUNDC1Q8IVP5 155 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PRR22Q8IZ63 422 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC34A3Q8N130 599 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CYP4Z2PQ8N1L4 340 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 BEST3Q8N1M1 668 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR2L13Q8N349 312 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF321PQ8N8H1 164 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF615Q8N8J6 731 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF527Q8NB42 609 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TMEM178AQ8NBL3 297 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 APCDD1LQ8NCL9 501 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C17orf47Q8NEP4 570 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FDCSPQ8NFU4 85 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR5M3Q8NGP4 307 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GOT1L1Q8NHS2 421 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FBXO30Q8TB52 745 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PNPT1Q8TCS8 783 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUDT8Q8WV74 236 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SNRNP27Q8WVK2 155 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ROPN1LQ96C74 230 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NEURL3Q96EH8 262 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RMND5BQ96G75 393 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ABHD17AQ96GS6 310 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NSL1Q96IY1 281 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 COL21A1Q96P44 957 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NPAS2Q99743 824 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HOPXQ9BPY8 73 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 INPP5KQ9BT40 448 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ITPAQ9BY32 194 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PRORYQ9H606 182 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ARMC7Q9H6L4 198 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 METTL7AQ9H8H3 244 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LIN28AQ9H9Z2 209 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TPT1P8Q9HAU6 139 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZBTB20Q9HC78 741 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLAMF7Q9NQ25 335 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF71Q9NQZ8 489 aaPredicted RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SDHAF3Q9NRP4 125 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PLA2G3Q9NZ20 509 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CALML5Q9NZT1 146 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LRFN1Q9P244 771 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TAGLN3Q9UI15 199 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF639Q9UID6 485 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TUBD1Q9UJT1 453 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC13A4Q9UKG4 626 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CBLCQ9ULV8 474 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF232Q9UNY5 417 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LHX6Q9UPM6 363 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LIPT1Q9Y234 373 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SSUH2Q9Y2M2 353 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PCDHGA9Q9Y5G4 932 aaKnown RBP5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NPFFR2Q9Y5X5 522 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SPTBP11277 2137 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUP210LQ5VU65 1888 aa5.05□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR5H15A6NDH6 313 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CCT8L1PA6NM43 557 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FAM47E-STBD1D6RA91 191 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GTPBP1O00178 669 aaKnown RBP5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MASP2O00187 686 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EBAG9O00559 213 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SCDO00767 359 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC28A2O43868 658 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HNRNPCL1O60812 293 aaKnown RBP5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 STX11O75558 287 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PPM1BO75688 479 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ATP5HO75947 161 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 F10P00742 488 aa5.04□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR12D1P0DN82 309 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms