RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 S1PR1P21453 382 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 SSTR4P31391 388 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 NUDT2P50583 147 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 GPR143P51810 404 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 EFNA3P52797 238 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 NRG3P56975 720 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 SLC37A1P57057 533 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 CDC20Q12834 499 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 GNA13Q14344 377 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 EXOSC7Q15024 291 aaKnown RBP9.43□□□□□ -0.9
NEDD9-214ENST00000513989 DEFB109BQ30KR1 87 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 LRIF1Q5T3J3 769 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ATAD3BQ5T9A4 648 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 DLEU7Q6UYE1 221 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ARPINQ7Z6K5 226 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF615Q8N8J6 731 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 C17orf47Q8NEP4 570 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 NUBPLQ8TB37 319 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ADAMTS15Q8TE58 950 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 DOK4Q8TEW6 326 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 TP53INP1Q96A56 240 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 RCN3Q96D15 328 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 NEURL3Q96EH8 262 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 CGREF1Q99674 301 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 NUDT9Q9BW91 350 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 LHPPQ9H008 270 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 PAIP1Q9H074 479 aaKnown RBP9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ING2Q9H160 280 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 SIRT3Q9NTG7 399 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ARL8BQ9NVJ2 186 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 GIN1Q9NXP7 522 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 MAP10Q9P2G4 905 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 HEMK1Q9Y5R4 338 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ASPDHA6ND91 283 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ARGFXA6NJG6 315 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 HRKO00198 91 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ACOX3O15254 700 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SLC28A2O43868 658 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 UBOX5O94941 541 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 CBX6O95503 412 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 CBX7O95931 251 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 HMGN2P05204 90 aaKnown RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 DRD5P21918 477 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ITGA3P26006 1051 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 CDKN2CP42773 168 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 CRATP43155 626 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 PPICP45877 212 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 EMDP50402 254 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 RNF4P78317 190 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF155Q12901 538 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 NFATC3Q12968 1075 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 TBR1Q16650 682 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 CYP27C1Q4G0S4 372 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 RUNDC3AQ59EK9 446 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 FHL5Q5TD97 284 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 AGAP7PQ5VUJ5 663 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 DNAJC14Q6Y2X3 702 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 RETREG3Q86VR2 466 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SLC15A4Q8N697 577 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 APCDD1LQ8NCL9 501 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 OR8J3Q8NGG0 315 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 OR52N2Q8NGI0 321 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 OR5AK3PQ8NH89 298 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 C16orf52Q8NHV5 167 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 GPR151Q8TDV0 419 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ELP5Q8TE02 316 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ZFP90Q8TF47 636 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SLC9A6Q92581 669 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 JADE3Q92613 823 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 THOC3Q96J01 351 aaKnown RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 LCORQ96JN0 433 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SLC35G5Q96KT7 338 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF354BQ96LW1 612 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 AGAP4Q96P64 663 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 STACQ99469 402 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ECSITQ9BQ95 431 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 Q9N2J8 555 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 EQTNQ9NQ60 294 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 EXD2Q9NVH0 621 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 STMN3Q9NZ72 180 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SLAMF8Q9P0V8 285 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 ABI3Q9P2A4 366 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 OR10H1Q9Y4A9 318 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 SCN3AQ9NY46 2000 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 TEX15Q9BXT5 2789 aa9.42□□□□□ -0.9
NEDD9-214ENST00000513989 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
NEDD9-214ENST00000513989 GYG2O15488 501 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 ASNA1O43681 348 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 WISP1O95388 367 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 AK1P00568 194 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 ALPPP05187 535 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 CD1EP15812 388 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 GABRA3P34903 492 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 PTGER1P34995 402 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 KRT20P35900 424 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 KHKP50053 298 aa9.41□□□□□ -0.9
NEDD9-214ENST00000513989 CCL11P51671 97 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms