RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FAM83EQ2M2I3 478 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 TCHHL1Q5QJ38 904 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-202ENST00000509637 CCNYL2Q5T2Q4 361 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 OR5M10Q6IEU7 315 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 SLC30A6Q6NXT4 461 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 NPSR1Q6W5P4 371 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 BIVMQ86UB2 503 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 OR52R1Q8NGF1 315 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 REPS1Q96D71 796 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 LCORQ96JN0 433 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-202ENST00000509637 DACH2Q96NX9 599 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 HBEGFQ99075 208 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 PIGQQ9BRB3 760 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 RTN4RQ9BZR6 473 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 RYDENQ9NUL5 291 aaKnown RBP14.43□□□□□ -0.1
RAB40C-202ENST00000509637 C6orf203Q9P0P8 240 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-202ENST00000509637 RNF14Q9UBS8 474 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 BCAP29Q9UHQ4 241 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 ADAM29Q9UKF5 820 aa14.43□□□□□ -0.1
RAB40C-202ENST00000509637 GPR55Q9Y2T6 319 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-202ENST00000509637 SH3D21A4FU49 640 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 H0YC42 278 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 PLOD2O00469 737 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 TO15178 435 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 TSPAN2O60636 221 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 ERAL1O75616 437 aaKnown RBP14.42□□□□□ -0.1
RAB40C-202ENST00000509637 PDYNP01213 254 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CT45A8P0DMV1 189 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CT45A9P0DMV2 189 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CYP4B1P13584 511 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 DRD2P14416 443 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 STX2P32856 288 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CDH13P55290 713 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 TPD52P55327 224 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-202ENST00000509637 NRG3P56975 720 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CORO7P57737 925 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 NKX6-1P78426 367 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CT45A2Q5DJT8 189 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 VWA1Q6PCB0 445 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 ZNF474Q6S9Z5 364 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-202ENST00000509637 C17orf53Q8N3J3 647 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-202ENST00000509637 OR4N2Q8NGD1 307 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 WNT2BQ93097 391 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 TMBIM1Q969X1 311 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 MARK4Q96L34 752 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 WFIKKN1Q96NZ8 548 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 MDFIQ99750 246 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 VPS11Q9H270 941 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 GRPEL1Q9HAV7 217 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 TESMINQ9Y4I5 508 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 CSPG4Q6UVK1 2322 aa14.42□□□□□ -0.1
RAB40C-202ENST00000509637 NSD1Q96L73 2696 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 RAI1Q7Z5J4 1906 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 ROS1P08922 2347 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 PRAMEF25A6NGN4 478 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 KIAA1324LA8MWY0 1029 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 HCRTR2O43614 444 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 RPS17P08708 135 aaKnown RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 ZNF708P17019 499 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 DRD5P21918 477 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 TYK2P29597 1187 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 CCKARP32238 428 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 PPICP45877 212 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 TMED10P49755 219 aaKnown RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 CCNG1P51959 295 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 MAPK12P53778 367 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 RAE1P78406 368 aaKnown RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 PHEXP78562 749 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 PLCXD2Q0VAA5 305 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 NAB1Q13506 487 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 ZNF628Q5EBL2 1059 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 FBXW10Q5XX13 1052 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 BTLAQ7Z6A9 289 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 TRPC4APQ8TEL6 797 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 ISL2Q96A47 359 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 STARD4Q96DR4 205 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 HS3ST6Q96QI5 342 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 YIPF4Q9BSR8 244 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 SFXN3Q9BWM7 321 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 NINJ2Q9NZG7 142 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 FLRT3Q9NZU0 649 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 SLC12A4Q9UP95 1085 aa14.41□□□□□ -0.1
RAB40C-202ENST00000509637 TNPO3Q9Y5L0 923 aaKnown RBP14.41□□□□□ -0.1
RAB40C-202ENST00000509637 A0A1W2PNV4 684 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 C1orf226A1L170 272 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 H0Y3Z8 333 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 CBR3O75828 277 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 RHOXF2BP0C7M4 288 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 SUCLG1P53597 346 aaKnown RBP14.4□□□□□ -0.1
RAB40C-202ENST00000509637 RCAN2Q14206 197 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 UAP1Q16222 522 aaPredicted RBP14.4□□□□□ -0.1
RAB40C-202ENST00000509637 CLEC9AQ6UXN8 241 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 MILR1Q7Z6M3 343 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 PLCZ1Q86YW0 608 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 C1orf52Q8N6N3 182 aaKnown RBP14.4□□□□□ -0.1
RAB40C-202ENST00000509637 OR14L1PQ8NHC6 308 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 PPP1R14CQ8TAE6 165 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 ZNF483Q8TF39 744 aaPredicted RBP14.4□□□□□ -0.1
RAB40C-202ENST00000509637 FIG4Q92562 907 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 KAT2AQ92830 837 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms