RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CORO7P57737 925 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 BTKQ06187 659 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 CRYZQ08257 329 aaKnown RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 RASA2Q15283 850 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 CEBPEQ15744 281 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 EIPR1Q53HC9 387 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 ZNF628Q5EBL2 1059 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 C10orf62Q5T681 223 aaPredicted RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 PLXDC2Q6UX71 529 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 NPSR1Q6W5P4 371 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 ZYG11AQ6WRX3 759 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 CCDC116Q8IYX3 515 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 OR7G1Q8NGA0 311 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 OR52R1Q8NGF1 315 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 OR9A2Q8NGT5 310 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 GOT1L1Q8NHS2 421 aaPredicted RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 NEIL3Q8TAT5 605 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 METTL6Q8TCB7 284 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 EXOSC8Q96B26 276 aaKnown RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 HSPBAP1Q96EW2 488 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 SECISBP2Q96T21 854 aaKnown RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 ANGPTL4Q9BY76 406 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 SHCBP1LQ9BZQ2 653 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 GALNT9Q9HCQ5 603 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 RASSF1Q9NS23 344 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 AHSPQ9NZD4 102 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 FETUBQ9UGM5 382 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 BCAP29Q9UHQ4 241 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 MCM8Q9UJA3 840 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 UTS2RQ9UKP6 389 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 CFL2Q9Y281 166 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 SLC6A5Q9Y345 797 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 PRRC2AP48634 2157 aaKnown RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 SYT5O00445 386 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 GNB5O14775 395 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 GUCY1B2O75343 617 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 PPM1BO75688 479 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ESRRBO95718 433 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 IL2RAP01589 272 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 KRT6AP02538 564 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 KRT6BP04259 564 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 HSD3B1P14060 373 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 CSNK2A2P19784 350 aaPredicted RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 TAC1P20366 129 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 DNASE1P24855 282 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 HSD3B2P26439 372 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 HMOX2P30519 316 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 TIA1P31483 386 aaKnown RBP eCLIP9.95□□□□□ -0.825e-7■■■■□ 23.6
RNF4-212ENST00000509258 UQCRC1P31930 480 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 KRT6CP48668 564 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ASCL1P50553 236 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 CDK9P50750 372 aaKnown RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 CSTF3Q12996 717 aaKnown RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 LCP2Q13094 533 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 FLYWCH1Q4VC44 716 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 FBXW10Q5XX13 1052 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 POMZP3Q6PJE2 187 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 LACC1Q8IV20 430 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ULK2Q8IYT8 1036 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 CCNYL1Q8N7R7 359 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 OR7G2Q8NG99 324 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 OR2W6PQ8NHA6 318 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ACMSDQ8TDX5 336 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 OMA1Q96E52 524 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ALPK1Q96QP1 1244 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 MID1IP1Q9NPA3 183 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 CRIM1Q9NZV1 1036 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 ZNF629Q9UEG4 869 aaPredicted RBP9.95□□□□□ -0.82
RNF4-212ENST00000509258 C15orf41Q9Y2V0 281 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 CCL27Q9Y4X3 112 aa9.95□□□□□ -0.82
RNF4-212ENST00000509258 A6NNC1 897 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 PLIN3O60664 434 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 ULK1O75385 1050 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 TRAPPC6AO75865 159 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 GOSR1O95249 250 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 EPPINO95925 133 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 HPNP05981 417 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 GSTA1P08263 222 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 CT45A8P0DMV1 189 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 CT45A9P0DMV2 189 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 BMP5P22003 454 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 PTPN6P29350 595 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 TIMP3P35625 211 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 DEKP35659 375 aaKnown RBP9.94□□□□□ -0.82
RNF4-212ENST00000509258 NAGLUP54802 743 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 PKNOX1P55347 436 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 TRA2BP62995 288 aaKnown RBP9.94□□□□□ -0.82
RNF4-212ENST00000509258 RCAN2Q14206 197 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 TOMM20Q15388 145 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 FBXL19-AS1Q494R0 122 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 ACSF3Q4G176 576 aaPredicted RBP9.94□□□□□ -0.82
RNF4-212ENST00000509258 CT45A2Q5DJT8 189 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 WIPI1Q5MNZ9 446 aaPredicted RBP9.94□□□□□ -0.82
RNF4-212ENST00000509258 LGSNQ5TDP6 509 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 GALNT18Q6P9A2 607 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 ANGPTL8Q6UXH0 198 aa9.94□□□□□ -0.82
RNF4-212ENST00000509258 YRDCQ86U90 279 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms