RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RNF138Q8WVD3 245 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 HGDQ93099 445 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GIMAP5Q96F15 307 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF764Q96H86 408 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ATP6V1G3Q96LB4 118 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 TEX37Q96LM6 180 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF354BQ96LW1 612 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 VSTM2LQ96N03 204 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 AMDHD1Q96NU7 426 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GAL3ST4Q96RP7 486 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 KLHDC3Q9BQ90 382 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CENPKQ9BS16 269 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 DEFB126Q9BYW3 111 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NUF2Q9BZD4 464 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GLIPR2Q9H4G4 154 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SERHL2Q9H4I8 314 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SLCO1B3Q9NPD5 702 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC35C2Q9NQQ7 365 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 FLRT3Q9NZU0 649 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 LRFN1Q9P244 771 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 MARCOQ9UEW3 520 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 UTS2RQ9UKP6 389 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 RAP2CQ9Y3L5 183 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 HEMK1Q9Y5R4 338 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CLCA3PQ9Y6N3 262 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 TRAV17A0A0B4J275 112 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 GNG14A0A1W2PPG7 69 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC28A1O00337 649 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SCAMP2O15127 329 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 PDPK1O15530 556 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR10H2O60403 315 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 TBX19O60806 448 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SCN2BO60939 215 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SEMA7AO75326 666 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CRCPO75575 148 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC25A12O75746 678 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 ZFAND5O76080 213 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 GLSO94925 669 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CBX6O95503 412 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 HSPA4LO95757 839 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SP1P08047 785 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CT45A8P0DMV1 189 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CT45A9P0DMV2 189 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 G6PDP11413 515 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 ICAM2P13598 275 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 PORP16435 677 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 IL12AP29459 219 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 MAP3K8P41279 467 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 FBXW4P57775 412 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 KCNK10P57789 538 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 NAA20P61599 178 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 PHC1P78364 1004 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 MAP4K2Q12851 820 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 GAB1Q13480 694 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 IMPG1Q17R60 797 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC9B1Q4ZJI4 515 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CT45A2Q5DJT8 189 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 PIGGQ5H8A4 983 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 FNDC7Q5VTL7 733 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM198Q66K66 360 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CGB2Q6NT52 195 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM107Q6UX40 140 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 HSDL2Q6YN16 418 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 RNF111Q6ZNA4 994 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 IKBIPQ70UQ0 350 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CYP4Z2PQ8N1L4 340 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 LRRC25Q8N386 305 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 LIX1Q8N485 282 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR7A2PQ8NGA2 310 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR4N2Q8NGD1 307 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR8K3Q8NH51 312 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM76AQ8TAV0 307 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 NR4A3Q92570 626 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 HOXB13Q92826 284 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 DAZLQ92904 295 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 RIT1Q92963 219 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OTUB1Q96FW1 271 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 MAELQ96JY0 434 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 MARK4Q96L34 752 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR52B2Q96RD2 323 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 RTN4RQ9BZR6 473 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 OR10A5Q9H207 317 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 WDR55Q9H6Y2 383 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 AKTIPQ9H8T0 292 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 ASIC5Q9NY37 505 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 STMN3Q9NZ72 180 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 EHD3Q9NZN3 535 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 FRRS1LQ9P0K9 344 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 CHCHD2Q9Y6H1 151 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 SPACA6W5XKT8 324 aa6.63□□□□□ -1.35
TOPBP1-207ENST00000509162 DOPEY2Q9Y3R5 2298 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SVILO95425 2214 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 KIAA1549Q9HCM3 1950 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 DYTNA2CJ06 578 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 UPK1AO00322 258 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 RGS14O43566 566 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SEC22BO75396 215 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 IGKV1D-16P01601 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms