RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 TMEM184AQ6ZMB5 413 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 SLC30A8Q8IWU4 369 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 NUP43Q8NFH3 380 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 OR7D2Q96RA2 312 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 RAB11FIP5Q9BXF6 653 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 SP140LQ9H930 580 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 RMI1Q9H9A7 625 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ANKHQ9HCJ1 492 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 TVP23BQ9NYZ1 205 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 MKLN1Q9UL63 735 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ENTPD4Q9Y227 616 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 PIAS3Q9Y6X2 628 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 COLEC10Q9Y6Z7 277 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 FANCMQ8IYD8 2048 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 SSX4O60224 188 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 PDE9AO76083 593 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 PPP2R1BP30154 601 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 TPMTP51580 245 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 PPP1CAP62136 330 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 ADAM15Q13444 863 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 MLC1Q15049 377 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 CYP4Z2PQ8N1L4 340 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 MFSD9Q8NBP5 474 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 SLC16A11Q8NCK7 471 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 OR4K5Q8NGD3 323 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 WDR36Q8NI36 951 aaKnown RBP13.61□□□□□ -0.23
DDX41-208ENST00000507955 ELP4Q96EB1 424 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 FNDC11Q9BVV2 318 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 C1QTNF7Q9BXJ2 289 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 EHD3Q9NZN3 535 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 CHST2Q9Y4C5 530 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 TAF4O00268 1085 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 CSNK2A2P19784 350 aaPredicted RBP13.61□□□□□ -0.23
DDX41-208ENST00000507955 AHRP35869 848 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 AVPR1BP47901 424 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 TRA2BP62995 288 aaKnown RBP13.61□□□□□ -0.23
DDX41-208ENST00000507955 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
DDX41-208ENST00000507955 PAQR7Q86WK9 346 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 OR7G2Q8NG99 324 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 FAM131CQ96AQ9 280 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 SCARF2Q96GP6 870 aaPredicted RBP13.61□□□□□ -0.23
DDX41-208ENST00000507955 ZNF681Q96N22 645 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 SLC6A18Q96N87 628 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 PLA2G12AQ9BZM1 189 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 LMAN2LQ9H0V9 348 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 EGLN3Q9H6Z9 239 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 KIR3DX1Q9H7L2 352 aa13.61□□□□□ -0.23
DDX41-208ENST00000507955 OR6C74A6NCV1 312 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CPSF4LA6NMK7 179 aaKnown RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 WWP2O00308 870 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 TLX2O43763 284 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 PRKYO43930 277 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ADAP00813 363 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 KHKP50053 298 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 NKX2-5P52952 324 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 GPR18Q14330 331 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 TSTQ16762 297 aaKnown RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 ZNF181Q2M3W8 571 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ATAD3BQ5T9A4 648 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ACSM5Q6NUN0 579 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 NATD1Q8N6N6 113 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 GAS2L1Q99501 681 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 FUZQ9BT04 418 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CNIH4Q9P003 139 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 IL20RAQ9UHF4 553 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 KLF15Q9UIH9 416 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SLCO1B1Q9Y6L6 691 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ISPDA4D126 451 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 DLGAP3O95886 979 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 MPIP34949 423 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 TRHRP34981 398 aaPredicted RBP13.6□□□□□ -0.23
DDX41-208ENST00000507955 SOX3P41225 446 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 LSSP48449 732 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 PDX1P52945 283 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 UGT2B15P54855 530 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ABATP80404 500 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 HTR4Q13639 388 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 NFATC4Q14934 902 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 ZNF311Q5JNZ3 666 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 CCNJQ5T5M9 372 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 MTSS1LQ765P7 747 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SPATC1Q76KD6 591 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 NRROSQ86YC3 692 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 AMER2Q8N7J2 671 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 FLVCR1-AS1Q8TAF5 88 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 KLHL6Q8WZ60 621 aa13.6□□□□□ -0.23
DDX41-208ENST00000507955 SLC9A6Q92581 669 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms