RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LCN1P1Q5VSP4 162 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TMEM220Q6QAJ8 160 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FRA10AC1Q70Z53 315 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PIM3Q86V86 326 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SLC2A12Q8TD20 617 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 MCOLN3Q8TDD5 553 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 KCNE4Q8WWG9 221 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ELMO1Q92556 727 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FUBP1Q96AE4 644 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PTERQ96BW5 349 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 MED30Q96HR3 178 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 REXO5Q96IC2 774 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 GBP5Q96PP8 586 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 GPHA2Q96T91 129 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 H2AFJQ9BTM1 129 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 APOOQ9BUR5 198 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ALG9Q9H6U8 611 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ERVMER34-1Q9H9K5 563 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PARVBQ9HBI1 364 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 WSB2Q9NYS7 404 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SELENONQ9NZV5 590 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 DLGAP2Q9P1A6 1054 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ATXN10Q9UBB4 475 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 A0A0U1RQS6 177 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 A0A1W2PQM1 296 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TRPC5OSA6NMA1 111 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PDLIM1O00151 329 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 GMFGO60234 142 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PSIP1O75475 530 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CATP04040 527 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 RPS17P08708 135 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ANXA5P08758 320 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 UMPSP11172 480 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CTRB1P17538 263 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ITGAXP20702 1163 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PIK3R1P27986 724 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 VHLP40337 213 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ETV5P41161 510 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 NME5P56597 212 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 RPL15P61313 204 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SEMG2Q02383 582 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TBL3Q12788 808 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CUL3Q13618 768 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ARHGAP19Q14CB8 494 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 OR4D1Q15615 310 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PPP1R3AQ16821 1122 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 C2orf76Q3KRA6 126 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF528Q3MIS6 628 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CTRB2Q6GPI1 263 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 IQCHQ86VS3 1027 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 DEFB107AQ8IZN7 70 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CLHC1Q8NHS4 586 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 RP9Q8TA86 221 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 GCDHQ92947 438 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 MR1Q95460 341 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 C11orf24Q96F05 449 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CACNG6Q9BXT2 260 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 MRPL37Q9BZE1 423 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 OSGEPL1Q9H4B0 414 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF385DQ9H6B1 395 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SERGEFQ9UGK8 458 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ADAMTS6Q9UKP5 1117 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TP53BP1Q12888 1972 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TNRC6BQ9UPQ9 1833 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 LOC100506127A0A0U1RQW1 187 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 A0A1W2PPW3 197 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SUPT3HB4E1H0 165 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 NDUFS8O00217 210 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PLK4O00444 970 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SUPT3HO75486 399 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 GMNNO75496 209 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 IDO1P14902 403 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CA5AP35218 305 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 BSGP35613 385 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CAPZA2P47755 286 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ERFP50548 548 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 EEF1A1P68104 462 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ADAM8P78325 824 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 EEF1A2Q05639 463 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 MADCAM1Q13477 382 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 NFATC4Q14934 902 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TGFBIQ15582 683 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TSNQ15631 228 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CMPK2Q5EBM0 449 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 TOR1AIP1Q5JTV8 583 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ARHGAP40Q5TG30 622 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 EEF1A1P5Q5VTE0 462 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SBSNQ6UWP8 590 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 WASH2PQ6VEQ5 465 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 LRRC74BQ6ZQY2 392 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 LRRC70Q7Z2Q7 622 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CLDN19Q8N6F1 224 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 OR8J1Q8NGP2 316 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ZCCHC14Q8WYQ9 949 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 FBXL8Q96CD0 374 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 PHF21BQ96EK2 531 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 SF3B5Q9BWJ5 86 aaKnown RBP6.69□□□□□ -1.34
CLCN3-206ENST00000507875 ALKBH4Q9NXW9 302 aa6.69□□□□□ -1.34
CLCN3-206ENST00000507875 CD274Q9NZQ7 290 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms