RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLAMF8Q9P0V8 285 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 ERVK-19Q9WJR5 959 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 FAAHO00519 579 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 CDC123O75794 336 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 S100A3P33764 101 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 POLE2P56282 527 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 LACTB2Q53H82 288 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC2A7Q6PXP3 512 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 FBXW8Q8N3Y1 598 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 RBMXL3Q8N7X1 1067 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 METTL21AQ8WXB1 218 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 DIO2Q92813 273 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF354BQ96LW1 612 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 RASL10BQ96S79 203 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC7A5P2Q9GIP4 190 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 MIEF1Q9NQG6 463 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 THUMPD1Q9NXG2 353 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 YARS2Q9Y2Z4 477 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZFAND5O76080 213 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRATO95237 230 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 AK1P00568 194 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 PNLIPRP2P54317 469 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 STX4Q12846 297 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 BNIP1Q12981 228 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 TMEM107Q6UX40 140 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SHISA6Q6ZSJ9 500 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ASRGL1Q7L266 308 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 PPP1R36Q96LQ0 422 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR52E6Q96RD3 313 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 IGHV3-20A0A0C4DH32 117 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 CCDC154A6NI56 674 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SEC24DO94855 1032 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 NTN1O95631 604 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC6A2P23975 617 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 MEP1AQ16819 746 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 KLHL26Q53HC5 615 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 GKAP1Q5VSY0 366 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC34A3Q8N130 599 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 Q8NA96 180 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC7A6OSQ96CW6 309 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 BTBD2Q9BX70 525 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ITPAQ9BY32 194 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ANGPTL4Q9BY76 406 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 ING2Q9H160 280 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 EVA1AQ9H8M9 152 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 AP3M1Q9Y2T2 418 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 C7orf72A4D263 438 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 FAM220BPB1ANY3 271 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 NME2P1O60361 137 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 NME2P22392 152 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 PPIBP23284 216 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 FOXO1Q12778 655 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 RGNQ15493 299 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC25A53Q5H9E4 307 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 RNF111Q6ZNA4 994 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 GRAMD2AQ8IUY3 354 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 SIAH3Q8IW03 269 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 NUP43Q8NFH3 380 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 FDCSPQ8NFU4 85 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 BRIX1Q8TDN6 353 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 TMEM41AQ96HV5 264 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 TRNT1Q96Q11 434 aaKnown RBP7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 RMND5AQ9H871 391 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 GIMAP4Q9NUV9 329 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 IRAK4Q9NWZ3 460 aa7.64□□□□□ -1.19
CDC42SE2-208ENST00000505065 PPM1BO75688 479 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGR2O95994 175 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 KRT16P08779 473 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARAFP10398 606 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 TBXA2RP21731 343 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 PRIM2P49643 509 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 VPS26BQ4G0F5 336 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 PGM2L1Q6PCE3 622 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 YTHDF3Q7Z739 585 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 CCDC197Q8NCU1 140 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR5L2Q8NGL0 311 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 VPS33AQ96AX1 596 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRRC58Q96CX6 371 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR7D2Q96RA2 312 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARL8BQ9NVJ2 186 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNE5Q9UJ90 142 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 VPS4AQ9UN37 437 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ERAL1O75616 437 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 HSD17B1P14061 328 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 CCT3P49368 545 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 DUSP5Q16690 384 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGKQ53H12 422 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 C6orf120Q7Z4R8 191 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZZZ3Q8IYH5 903 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 RILPQ96NA2 401 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 CGREF1Q99674 301 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 HOPXQ9BPY8 73 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 UBQLN3Q9H347 655 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 EXOSC3Q9NQT5 275 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 OLAHQ9NV23 265 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms