RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ADAM21Q9UKJ8 722 aa11.99□□□□□ -0.49
DDX41-204ENST00000504807 PTGDR2Q9Y5Y4 395 aa11.99□□□□□ -0.49
DDX41-204ENST00000504807 TLN2Q9Y4G6 2542 aa11.99□□□□□ -0.49
DDX41-204ENST00000504807 NINQ8N4C6 2090 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 PCDH7O60245 1069 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 WDR1O75083 606 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 PPM1BO75688 479 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 PROCP04070 461 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 HOXD4P09016 255 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 CSNK2A2P19784 350 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 NAGLUP54802 743 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 CSTF3Q12996 717 aaKnown RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 RASA2Q15283 850 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 C10orf62Q5T681 223 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 WLSQ5T9L3 541 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 ACAD11Q709F0 780 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 DND1Q8IYX4 353 aaKnown RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 EID3Q8N140 333 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 WDSUB1Q8N9V3 476 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 C7orf57Q8NEG2 295 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 OR4N2Q8NGD1 307 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 METTL6Q8TCB7 284 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 EXOSC8Q96B26 276 aaKnown RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 SARAFQ96BY9 339 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 MTBPQ96DY7 904 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 RMND5BQ96G75 393 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 UGT2B28Q9BY64 529 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 ZNF395Q9H8N7 513 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 KCNJ16Q9NPI9 418 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 QPCTLQ9NXS2 382 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 AHSPQ9NZD4 102 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 PSMC3IPQ9P2W1 217 aaPredicted RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 BCAP29Q9UHQ4 241 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 MCM8Q9UJA3 840 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 UTS2RQ9UKP6 389 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 CCL27Q9Y4X3 112 aa11.98□□□□□ -0.49
DDX41-204ENST00000504807 INTS1Q8N201 2190 aaKnown RBP11.98□□□□□ -0.49
DDX41-204ENST00000504807 C15orf38-AP3S2A0A0A6YYH1 394 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 ICOSLGO75144 302 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 CTAG2O75638 210 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 TRAPPC6AO75865 159 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 FREM3P0C091 2139 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 CT45A8P0DMV1 189 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 CT45A9P0DMV2 189 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 BMP7P18075 431 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 ZFP36L2P47974 494 aaKnown RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 ZNF136P52737 540 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 BTKQ06187 659 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 LCP2Q13094 533 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 CT45A2Q5DJT8 189 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 RIPPLY2Q5TAB7 128 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 HLA-DQA1Q5Y7H0 255 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 TIGD3Q6B0B8 471 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 VASNQ6EMK4 673 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 ANGPTL8Q6UXH0 198 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 YRDCQ86U90 279 aaKnown RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 IFT20Q8IY31 132 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 CEP112Q8N8E3 955 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 KIF18AQ8NI77 898 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX41-204ENST00000504807 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 TMBIM1Q969X1 311 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 LCORQ96JN0 433 aaPredicted RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 SH3GL2Q99962 352 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 G6PC3Q9BUM1 346 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 SHCBP1LQ9BZQ2 653 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 RTN4RQ9BZR6 473 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 PRDM14Q9GZV8 571 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 SERHLQ9NQF3 203 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 FLRT3Q9NZU0 649 aa11.97□□□□□ -0.49
DDX41-204ENST00000504807 GPR55Q9Y2T6 319 aaPredicted RBP11.97□□□□□ -0.49
DDX41-204ENST00000504807 MED12Q93074 2177 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 GOLGA6L10A6NI86 522 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 RNF212BA8MTL3 300 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TP53I11O14683 189 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TO15178 435 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TSPAN2O60636 221 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 ULK1O75385 1050 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 ESRRBO95718 433 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 HSD3B1P14060 373 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TAC1P20366 129 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 HSD3B2P26439 372 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TIA1P31483 386 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDX41-204ENST00000504807 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
DDX41-204ENST00000504807 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
DDX41-204ENST00000504807 AGFG1P52594 562 aaKnown RBP11.96□□□□□ -0.49
DDX41-204ENST00000504807 TRA2BP62995 288 aaKnown RBP11.96□□□□□ -0.49
DDX41-204ENST00000504807 PLCXD2Q0VAA5 305 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 TBCELQ5QJ74 424 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 GALNT18Q6P9A2 607 aa11.96□□□□□ -0.49
DDX41-204ENST00000504807 ZYG11AQ6WRX3 759 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms