RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GNALP38405 381 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ACTA2P62736 377 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ACTG2P63267 376 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 TMEM115Q12893 351 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 Q6ZVL8 140 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 NRSN1Q8IZ57 195 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 FYTTD1Q96QD9 318 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 B3GNT4Q9C0J1 378 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 MRPL15Q9P015 296 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 KCNN3Q9UGI6 736 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PLEKHA6Q9Y2H5 1048 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PCDHGA6Q9Y5G7 932 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 STRCQ7RTU9 1775 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ARPC5O15511 151 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 HLA-EP13747 358 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 AIMP2Q13155 320 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 XAF1Q6GPH4 301 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 Q6ZVU0 165 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 VASH1Q7L8A9 365 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 DCUN1D3Q8IWE4 304 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PAAF1Q9BRP4 392 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 KLHL42Q9P2K6 505 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 SH2B3Q9UQQ2 575 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 E7EQ34 232 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TSPAN6O43657 245 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 APOC1P02654 83 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 GKN3PP0CG01 181 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 ZNF865P0CJ78 1059 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 SSTR2P30874 369 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 UAP1L1Q3KQV9 507 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TNFRSF12AQ9NP84 129 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 IL26Q9NPH9 171 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 PCCBP05166 539 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 APEX1P27695 318 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 GDI1P31150 447 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TBPL1P62380 186 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 PIN1Q13526 163 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 FAM129CQ86XR2 697 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 UBE2FQ969M7 185 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 YIPF1Q9Y548 306 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 NRAPQ86VF7 1730 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 NDUFS4O43181 175 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TGM6O95932 706 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 GABRA5P31644 462 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 AKT2P31751 481 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 CBARPQ8N350 705 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 ZNF366Q8N895 744 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 FATE1Q969F0 183 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 RHPN2P1A8MT19 583 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 M0R036 132 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 UCHL1P09936 223 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 GIFP27352 417 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 PSPHP78330 225 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 PDGFRLQ15198 375 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 LRRTM3Q86VH5 581 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 OR8J2Q8NGG1 315 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 ZCCHC10Q8TBK6 192 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 SGTBQ96EQ0 304 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TAS2R16Q9NYV7 291 aa16.34■□□□□ 0.21
HMGXB3-201ENST00000502717 TRBV2A0A0J9YWF9 115 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 COCHO43405 550 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 SC5DO75845 299 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 SLC22A5O76082 557 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 ACP2P11117 423 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 FLYWCH1Q4VC44 716 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 CATSPEREQ5SY80 951 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 BTLAQ7Z6A9 289 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 LCN9Q8WX39 176 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 PLAC1Q9HBJ0 212 aa16.33■□□□□ 0.21
HMGXB3-201ENST00000502717 RPS19P39019 145 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 OR3A2P47893 321 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 SUOXP51687 545 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 ARHGDIBP52566 201 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 SETD7Q8WTS6 366 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 RIT1Q92963 219 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 ASIC5Q9NY37 505 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 IL36AQ9UHA7 158 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 C13orf42A0A1B0GVH6 325 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 RASGRP1O95267 797 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 NUDT1P36639 197 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 GALNTL5Q7Z4T8 443 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 KCTD12Q96CX2 325 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 RBM18Q96H35 190 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 NUPL2O15504 423 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 RBMS1P29558 406 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 CDKN2CP42773 168 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 ART1P52961 327 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 NXPE4Q6UWF7 544 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 OR52P1PQ8NH57 321 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 TMEM40Q8WWA1 233 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 SCAMP4Q969E2 229 aa16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF419Q96HQ0 510 aaPredicted RBP16.33■□□□□ 0.2
HMGXB3-201ENST00000502717 FAM46AQ96IP4 442 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms