RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 IGKV6D-41A0A0C4DH26 115 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 KLF18A0A0U1RQI7 1052 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 A0A1B0GVL5 298 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCDC162PA2VCL2 907 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 VPS37CA5D8V6 355 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 IQCF5A8MTL0 148 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 C17orf105B2RV13 164 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TARM1B6A8C7 271 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 E5RGE8 158 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRR23D1E9PI22 279 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 NPIPB8E9PQR5 432 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCL24O00175 119 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 RHODO00212 210 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 WWP2O00308 870 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZSCAN12O43309 604 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CLN5O75503 358 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 DEXIO95424 95 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 WDPCPO95876 746 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 LDLRP01130 860 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRT6AP02538 564 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRT19P08727 400 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 IGFBP1P08833 259 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRR23D2P0DMB1 279 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 AMD1P17707 334 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CD58P19256 250 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 MSR1P21757 451 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 LCN1P31025 176 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 GPR4P46093 362 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PGGT1BP53609 377 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 GEMP55040 296 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TAS2R38P59533 333 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLAQ13239 276 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 EXOSC2Q13868 293 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF268Q14587 947 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 UGT3A2Q3SY77 523 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF542PQ5EBM4 170 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 XKR7Q5GH72 579 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 BEX5Q5H9J7 111 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PPP6R3Q5H9R7 873 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAET1LQ5VY80 246 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PLCXD3Q63HM9 321 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 HIST2H2AA3Q6FI13 130 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM225Q6GV28 225 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR7E24Q6IFN5 339 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM53Q6P2H8 277 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TTC27Q6P3X3 843 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 FUT10Q6P4F1 479 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNIP4Q6PIL6 250 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM220Q6QAJ8 160 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SASS6Q6UVJ0 657 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 Q6ZPB1 254 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CENPUQ71F23 418 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TRMT1LQ7Z2T5 733 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF589Q86UQ0 364 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PAQR7Q86WK9 346 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRT222Q8N1A0 295 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 MUC20Q8N307 709 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC25A41Q8N5S1 370 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR4K14Q8NGD5 310 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR13F1Q8NGS4 319 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 OSR1Q8TAX0 266 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF596Q8TC21 504 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PDCD6IPQ8WUM4 868 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPRYD4Q8WW59 207 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 DAZLQ92904 295 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLCO2A1Q92959 643 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TAAR8Q969N4 342 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 OPTNQ96CV9 577 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF479Q96JC4 524 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 C20orf173Q96LM9 149 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 C12orf42Q96LP6 360 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 VSTM2LQ96N03 204 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 BBC3Q96PG8 261 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TECTBQ96PL2 329 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCDC3Q9BQI4 270 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 RBM24Q9BX46 236 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 FRMD8P1Q9BZ68 369 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 C10orf88Q9H8K7 445 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 UBTD1Q9HAC8 227 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF160Q9HCG1 818 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 MRPL47Q9HD33 250 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CNGB3Q9NQW8 809 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM51Q9NW97 253 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 MRPL22Q9NWU5 206 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ASB6Q9NWX5 421 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC2A8Q9NY64 477 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 FOXJ2Q9P0K8 574 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 STX18Q9P2W9 335 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 LHX3Q9UBR4 397 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 FBXL2Q9UKC9 423 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 GAB2Q9UQC2 676 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 RNF24Q9Y225 148 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 PIGLQ9Y2B2 252 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 NSG2Q9Y328 171 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPIN1Q9Y657 262 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 BZW2Q9Y6E2 419 aaKnown RBP3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 CASP8AP2Q9UKL3 1982 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 MEX3AA1L020 520 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 CD8B2A6NJW9 211 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms