RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CNKSR3Q6P9H4 555 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 HDDC2Q7Z4H3 204 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CACUL1Q86Y37 369 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MSRB3Q8IXL7 192 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LIX1Q8N485 282 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR13C4Q8NGS5 318 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TWIST2Q8WVJ9 160 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RAD51AP1Q96B01 352 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 AMDHD1Q96NU7 426 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC38A3Q99624 504 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 GPR22Q99680 433 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MARVELD1Q9BSK0 173 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CHIAQ9BZP6 476 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 POLR1EQ9GZS1 481 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ACTL8Q9H568 366 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ALG9Q9H6U8 611 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 C11orf16Q9NQ32 467 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 BIN3Q9NQY0 253 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SDR39U1Q9NRG7 319 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 THUMPD1Q9NXG2 353 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SCN3BQ9NY72 215 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PSORS1C1Q9UIG5 152 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 C3orf18Q9UK00 162 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PIAS3Q9Y6X2 628 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM95CA0A1B0GW59 222 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 SHISA3A0PJX4 238 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF840PA6NDX5 716 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC28A1O00337 649 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 SULT1C2O00338 296 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 PSMD3O43242 534 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 HPXP02790 462 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 ANXA6P08133 673 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 RPS2P15880 293 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 HTR1EP28566 365 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 TIE1P35590 1138 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 SGSHP51688 502 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 TRA2BP62995 288 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 EMX2Q04743 252 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM98BQ52LJ0 330 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 HSD17B12Q53GQ0 312 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 ABHD17CQ6PCB6 329 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 XKRXQ6PP77 449 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 PDZD3Q86UT5 571 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 Q8N402 240 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 FTMTQ8N4E7 242 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 NANOGP1Q8N7R0 232 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 C1orf162Q8NEQ5 155 aaPredicted RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR1S1Q8NH92 325 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 PROKR1Q8TCW9 393 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 CREB3L4Q8TEY5 395 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 UCN3Q969E3 161 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 CDK15Q96Q40 435 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 DDOQ99489 341 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 KCNH6Q9H252 994 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 RIMS4Q9H426 269 aaPredicted RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 RBFOX1Q9NWB1 397 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC25A37Q9NYZ2 338 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 COMMD3Q9UBI1 195 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF225Q9UK10 706 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 LSM7Q9UK45 103 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 CLCA2Q9UQC9 943 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 CMAHPQ9Y471 501 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 AP1M2Q9Y6Q5 423 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 A3GALT2U3KPV4 340 aa5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 TDRD15B5MCY1 1934 aaKnown RBP5.46□□□□□ -1.53
SOX2-OT-218ENST00000498731 A0A087X1B8 175 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 PQLC2LA1A4F0 135 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 MEX3AA1L020 520 aaKnown RBP5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLCO1B7G3V0H7 640 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 SERPINA1P01009 418 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 FGBP02675 491 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 KLKB1P03952 638 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 C8AP07357 584 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 MLNP12872 115 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ADCYAP1P18509 176 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 NFYBP25208 207 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 CRYBB2P43320 205 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ALDH9A1P49189 494 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 DHPSP49366 369 aaPredicted RBP5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 SSTP61278 116 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 TECRLQ5HYJ1 363 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ETV3LQ6ZN32 361 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 PIWIL4Q7Z3Z4 852 aaKnown RBP5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 TMEM135Q86UB9 458 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 LRRTM4Q86VH4 590 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF687Q8N1G0 1237 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 OXR1Q8N573 874 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 NR4A3Q92570 626 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 CCDC74AQ96AQ1 378 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 C14orf144Q96I85 54 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ADAD1Q96M93 576 aaKnown RBP5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 MGLLQ99685 303 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 SOX7Q9BT81 388 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 LRFN3Q9BTN0 628 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 MED18Q9BUE0 208 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 IGFLR1Q9H665 355 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 EXOSC3Q9NQT5 275 aaKnown RBP5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 HCFC1R1Q9NWW0 138 aa5.46□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF226Q9NYT6 803 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms